Job Description P32152 Confidence 89.85% Date Thu Jan 5 11:49:32 GMT 2012 Rank 170 Aligned Residues 86 % Identity 23% Template c2vz4A_ PDB info PDB header:transcription Chain: A: PDB Molecule:hth-type transcriptional activator tipa; PDBTitle: the n-terminal domain of merr-like protein tipal bound to2 promoter dna Resolution 2.90 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	P	G	E	L	A	Q	Q	T	G	V	S	G	R	T	I	L	R	D	I	D	Y	L	N	F	T	L	N	G	K	A	R	I	F	A	S	G	S	A	G	Y	Q	L	E	I	F	E	R	R	S	F	F	Q	L	L	Q	K	H	D	N	D	D	R	L	L	A	L	L	L	L	N	T	F	T	P	R	A	Q	L	A
Query Conservation
Alig confidence																								.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	V	G	Q	V	A	G	F	A	G	V	T	V	R	T	L	H	H	Y	D	D	I	.	.	.	.	.	.	G	L	L	V	P	S	E	R	S	H	A	G	H	R	R	.	.	.	.	.	.	.	.	.	.	.	Y	S	D	A	D	L	D	R	L	Q	Q	I	L	F	Y	R	E	L	G	F	P	L	D	E	V	A
Template Known Secondary structure											T													.	.	.	.	.	.	T	S	S			S				S	S					.	.	.	.	.	.	.	.	.	.	.	B																	T	T
Template Predicted Secondary structure																								.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.							.	.	.	.	30	.	.	.	.	.	.	.	.	.	40												.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
		99	100	.	.	.	.							.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure								.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.
Query Sequence		S	A	L	N	L	P	.	.	.	.	.	.	E	T	W	V	A	E	R	L	P	R	L	K	Q	R	Y	E	R
Query Conservation								.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.
Template Conservation
Template Sequence		A	L	L	D	D	R	A	H	L	R	R	Q	H	E	L	L	S	A	R	I	G	K	L	Q	K	M	A	A	A
Template Known Secondary structure					T
Template Predicted Secondary structure
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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