Job Description P32152 Confidence 97.26% Date Thu Jan 5 11:49:32 GMT 2012 Rank 26 Aligned Residues 95 % Identity 14% Template c1u78A_ PDB info PDB header:dna binding protein/dna Chain: A: PDB Molecule:transposable element tc3 transposase; PDBTitle: structure of the bipartite dna-binding domain of tc32 transposase bound to transposon dna Resolution 2.69 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	N	E	R	Q	L	K	I	V	D	L	L	E	Q	Q	P	R	T	P	G	E	L	A	Q	Q	T	G	V	S	G	R	T	I	L	R	D	I	D	Y	L	N	F	T	L	N	G	K	A	R	I	F	A	S	G	S	A	G	Y	Q	L	E	I	F	E	R	R	S	F	F	Q	L	L	Q	K	H	D	N	D	D
Query Conservation
Alig confidence																																									.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	L	S	D	T	E	R	A	Q	L	D	V	M	K	L	L	N	V	S	L	H	E	M	S	R	K	I	S	R	S	R	H	C	I	R	V	Y	L	K	.	.	.	.	.	.	.	D	P	V	S	Y	G	T	S	K	R	A	P	R	R	K	A	L	S	.	.	.	.	.	.	.	.	.	.	.	.	V	R	D	E
Template Known Secondary structure																	T	T											T												.	.	.	.	.	.	.	S	G	G	G	T	T										S	S		.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																									.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.								.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.													.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.			.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure																								.	.
Query SS confidence																								.	.
Query Sequence		R	L	L	A	L	L	L	L	N	T	F	T	P	R	A	Q	L	A	S	A	L	N	.	.	L	P	E	T	W	V	A	E	R	L	P	R
Query Conservation																								.	.
Alig confidence																								.	.
Template Conservation
Template Sequence		R	N	V	I	R	A	A	S	N	S	C	K	T	A	R	D	I	R	N	E	L	Q	L	S	A	S	K	R	T	I	L	N	V	I	K	R
Template Known Secondary structure																						T	T			S
Template Predicted Secondary structure
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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