Job Description P32152 Confidence 99.85% Date Thu Jan 5 11:49:32 GMT 2012 Rank 11 Aligned Residues 180 % Identity 8% Template c1h99A_ PDB info PDB header:transcriptional antiterminator Chain: A: PDB Molecule:transcription antiterminator lict; PDBTitle: prd of lict antiterminator from bacillus subtilis Resolution 1.55 Å

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		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.						.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.														.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	R	D	N	L	Q	H	L	S	T	A	C	D	N	Q	H	R	W	P	L	M	Q	G	D	Y	.	.	.	.	.	L	S	S	L	I	L	A	I	Y	A	L	R	N	Q	L	T	D	E	W	P	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	P	G	D	E	I	K	Q	I	V	E	H	S	G	L	F
Query Conservation																											.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	E	C	M	E	V	S	E	E	I	I	S	Y	A	K	L	Q	L	G	K	K	L	N	D	S	I	Y	V	S	L	T	D	H	I	N	F	A	I	Q	R	N	Q	K	G	L	D	I	K	N	A	L	L	W	E	T	K	R	L	Y	K	D	E	F	A	I	G	K	E	A	L	V	M	V	K	N	K	T	G	V	S
Template Known Secondary structure																					S				T																			T	T						T	T								T																			S
Template Predicted Secondary structure
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		225	.	.	.	.	230	.	.	.	.	.	.	.					.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.		.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.		.	.
Predicted Secondary structure															.	.	.	.																																.																													.
Query SS confidence															.	.	.	.																																.																													.
Query Sequence		L	G	D	N	A	V	R	T	L	T	G	L	I	.	.	.	.	E	K	Q	H	Q	Q	A	Q	V	I	S	A	D	N	V	Q	G	L	L	Q	R	V	P	G	I	A	S	L	N	I	I	.	D	A	Q	L	V	E	N	I	T	G	H	L	L	R	C	L	A	A	P	V	W	I	A	E	H	R	Q	S	.	S	M
Query Conservation															.	.	.	.																																.																													.
Alig confidence															.	.	.	.																																.																													.
Template Conservation
Template Sequence		L	P	E	D	E	A	G	F	I	A	L	H	I	V	N	A	E	L	N	E	E	M	P	N	I	I	N	I	T	K	V	M	E	E	I	L	S	I	V	K	Y	H	F	K	I	E	F	N	E	E	S	L	H	Y	Y	R	F	V	T	D	L	K	F	F	A	Q	R	L	F	N	G	T	H	M	E	D	D	F	L	L
Template Known Secondary structure																			T	T	S																								T					T	T	S																				T						T
Template Predicted Secondary structure
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.			.	.	.	.	.	.	.	.	340	.	.
Predicted Secondary structure																																			.	.
Query SS confidence																																			.	.
Query Sequence		N	N	L	K	A	A	W	P	A	A	F	D	M	S	L	H	F	I	T	L	L	R	E	Q	L	D	I	P	L	F	D	S	D	.	.	L	I	G	L	Y	F	A	C	A	L	E
Query Conservation																																			.	.
Alig confidence																																			.	.
Template Conservation
Template Sequence		D	T	V	K	E	K	Y	H	R	A	Y	E	C	T	K	K	I	Q	T	Y	I	E	R	E	Y	E	H	K	L	T	S	D	E	L	L	Y	L	T	I	D	I	E	R	V	V	K
Template Known Secondary structure								T
Template Predicted Secondary structure
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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