Job Description P0AFI0 Confidence 96.80% Date Thu Jan 5 11:26:22 GMT 2012 Rank 108 Aligned Residues 149 % Identity 16% Template d2ozlb1 SCOP info Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Branched-chain alpha-keto acid dehydrogenase Pyr module Resolution 1.90

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		375	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.					.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450
Predicted Secondary structure																					.	.	.	.
Query SS confidence																					.	.	.	.
Query Sequence		A	L	S	A	V	R	D	V	L	R	E	N	Q	D	I	Y	L	V	N	.	.	.	.	E	G	A	N	T	L	D	N	A	R	N	I	I	D	M	Y	K	P	R	R	R	L	D	C	G	T	W	G	V	M	G	I	G	M	G	Y	A	I	G	A	S	V	T	S	G	S	P	V	V	A	I	E	G	D	S	A	F
Query Conservation																					.	.	.	.
Alig confidence																					.	.	.	.																											.	.
Template Conservation																																																			.	.
Template Sequence		I	N	Q	G	M	D	E	E	L	E	R	D	E	K	V	F	L	L	G	E	E	V	A	Q	Y	D	G	A	Y	K	V	S	R	G	L	W	K	K	Y	G	D	K	R	I	I	D	T	P	I	.	.	S	E	M	G	F	A	G	I	A	V	G	A	A	M	A	G	L	R	P	I	C	E	F	M	T	F	N	F	S
Template Known Secondary structure														T	T						T	T	S	S	T	T			T	T	S	T	T	T	T							T	T	T						S	.	.															T	T								S	S	G	G	G	G
Template Predicted Secondary structure																																																			.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.			.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		451	.	.	.	.	.	.	.	.	460	.	.	.								.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.		510	.	.	.	.	.	.	.	.	.	520	.	.
Predicted Secondary structure															.	.	.	.	.	.	.																																															.
Query SS confidence															.	.	.	.	.	.	.																																															.
Query Sequence		G	F	S	G	M	E	I	E	T	I	C	R	Y	.	.	.	.	.	.	.	N	L	P	V	T	I	V	I	F	N	N	G	G	I	Y	R	G	D	G	V	D	L	S	G	A	G	A	P	S	P	T	D	L	L	H	H	A	R	Y	D	K	L	M	D	A	F	.	R	G	V	G	Y	N	V	T	T	T	D	E	L
Query Conservation															.	.	.	.	.	.	.																																															.
Alig confidence															.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	Q	A	I	D	Q	V	I	N	S	A	A	K	T	Y	Y	M	S	G	G	L	Q	P	V	P	I	V	F	R	G	P	N	G	A	S	A	G	V	A	.	.	.	.	.	.	.	.	.	.	.	.	.	A	Q	H	S	Q	C	F	A	A	W	Y	G	H	C	P	G	L	K	V	V	S	P	W	N	S	E	D	A
Template Known Secondary structure		G	G	G						T	T	T	T	T					T	T	S	S												S			S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G										T	S	T	T								S
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.														.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		523	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	H	A	L	T	T	G	I	Q	S	R	K	P	T	I	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	G	L	I	K	S	A	I	R	D	N	N	P	V	V	V
Template Known Secondary structure											S	S	S
Template Predicted Secondary structure
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions