Job Description P0AFI0 Confidence 88.70% Date Thu Jan 5 11:26:22 GMT 2012 Rank 132 Aligned Residues 158 % Identity 13% Template d2ieaa1 SCOP info Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) TK-like Pyr module Resolution 1.85

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		11	.	.	.	.	.	.	.	.	20	.	.	.			.	.	.	.	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.									.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70						.	.	.
Predicted Secondary structure															.	.									.																.	.	.	.	.	.	.	.							.																			.	.	.	.	.
Query SS confidence															.	.									.																.	.	.	.	.	.	.	.							.																			.	.	.	.	.
Query Sequence		M	H	I	I	V	E	A	L	K	Q	N	N	I	.	.	D	T	I	Y	G	V	V	G	.	I	P	V	T	D	M	A	R	H	A	Q	A	E	G	I	.	.	.	.	.	.	.	.	R	Y	I	G	F	R	.	H	E	Q	S	A	G	Y	A	A	A	A	S	G	F	L	T	Q	K	.	.	.	.	.	P	G	I
Query Conservation															.	.									.																.	.	.	.	.	.	.	.							.																			.	.	.	.	.
Alig confidence															.	.									.																.	.	.	.	.	.	.	.							.																			.	.	.	.	.
Template Conservation
Template Sequence		V	R	A	L	N	V	M	L	K	N	K	S	I	K	D	R	L	V	P	I	I	A	D	E	A	R	T	F	G	M	E	G	L	F	R	Q	I	G	I	Y	S	P	E	D	E	K	G	Q	I	L	Q	E	G	I	N	E	L	G	A	G	C	S	W	L	A	A	A	T	S	Y	S	T	N	N	L	P	M	I	P	F
Template Known Secondary structure									T	T		T	T	T	G	G	G						S	S		S	G	G	G	T										B	B				B	T	T			B					S														T					T	S
Template Predicted Secondary structure
Template SS confidence
		499	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																																																											.
Query SS confidence																																																											.
Query Sequence		C	L	T	V	S	A	P	G	F	L	N	G	L	T	A	L	A	N	A	T	V	N	G	F	P	M	I	M	I	S	G	S	S	D	R	A	I	V	D	L	Q	Q	G	D	Y	E	E	L	D	Q	M	N	A	A	K	P	Y	.	A	K	A	A	F	R	V	N	Q	P	Q	D	L	G	I	A	L	A	R	A	I	R
Query Conservation																																																											.
Alig confidence																																																											.
Template Conservation
Template Sequence		Y	I	Y	Y	S	M	F	G	F	Q	R	I	G	D	L	C	W	A	A	G	D	Q	Q	A	R	G	F	L	I	G	G	T	S	G	R	T	T	L	N	G	E	G	L	Q	H	E	D	G	H	S	H	I	Q	S	L	T	I	P	N	C	I	S	Y	D	P	A	Y	A	Y	E	V	A	V	I	M	H	D	G	L	E
Template Known Secondary structure						G	G	G	S														T	T			S						S		S	T	T	T	S	T	T	T		T	T	T			S							T	T	S	T	T							S	S
Template Predicted Secondary structure
Template SS confidence
		596	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	V	S	G	R	P	G	G	V	Y	L	D	L	P	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	M	Y	G	E	K	Q	E	N	V	Y	Y	Y	I	T	T
Template Known Secondary structure					S	T	T
Template Predicted Secondary structure
Template SS confidence
		676	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions