Job Description P0AFI0 Confidence 99.18% Date Thu Jan 5 11:26:22 GMT 2012 Rank 79 Aligned Residues 190 % Identity 12% Template d2c42a2 SCOP info Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) PFOR PP module Resolution 1.78

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		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.								.	.	.	.	.	.	.	420	.	.	.
Predicted Secondary structure																																																																.	.	.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.	.	.
Query Sequence		H	K	Q	Q	N	A	Q	K	M	H	E	K	L	S	T	D	T	Q	P	L	N	Y	F	N	A	L	S	A	V	R	D	V	L	R	E	N	Q	D	I	Y	L	V	N	E	G	A	N	T	L	D	N	A	R	N	I	I	D	M	Y	K	P	R	.	.	.	.	.	.	.	R	R	L	D	C	G	T	W	G	V	M
Query Conservation																																																																.	.	.	.	.	.	.
Alig confidence																																						.	.																									.	.	.	.	.	.	.
Template Conservation																																						.	.
Template Sequence		L	K	G	S	Q	F	Q	E	P	L	M	E	F	S	G	A	C	S	G	C	G	E	T	P	Y	V	R	V	I	T	Q	L	F	G	E	R	.	.	M	F	I	A	N	A	T	G	C	S	S	I	W	G	A	S	A	P	S	M	P	Y	K	T	N	R	L	G	Q	G	P	A	W	G	N	S	L	F	E	D	A	A
Template Known Secondary structure						T	T	S			S	B		S		S			T	T		S	S												G	G	G	.	.							S	S									T	T				B				T	T	S										S	T	T
Template Predicted Secondary structure																																						.	.
Template SS confidence
		796	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.			.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.
		424	.	.	.	.	.	430	.	.	.	.	.																																																																			.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	I	G	M	G	Y	A	I	G	A	S	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	Y	G	F	G	M	N	M	S	M	F	A	R	R	T	H	L	A	D	L	A	A	K	A	L	E	S	D	A	S	G	D	V	K	E	A	L	Q	G	W	L	A	G	K	N	D	P	I	K	S	K	E	Y	G	D	K	L	K	K	L	L	A	G	Q	K	D	G	L	L	G	Q	I	A	A	M	S	D	L	Y	T
Template Known Secondary structure																											T	T	T																T	T	S															T	T	T			S								T	T	G	G	G	T	S
Template Predicted Secondary structure
Template SS confidence
		874	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.
		438	.	440	.	.	.	.	.	.	.	.		.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.							.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510
Predicted Secondary structure													.																																									.	.	.	.	.	.
Query SS confidence													.																																									.	.	.	.	.	.
Query Sequence		G	S	P	V	V	A	I	E	G	D	S	.	A	F	G	F	S	G	M	E	I	E	T	I	C	R	Y	N	L	P	V	T	I	V	I	F	N	N	G	G	I	Y	R	G	D	G	V	D	L	S	G	A	.	.	.	.	.	.	G	A	P	S	P	T	D	L	L	H	H	A	R	Y	D	K	L	M	D	A	F	R
Query Conservation													.																																									.	.	.	.	.	.
Alig confidence													.																																									.	.	.	.	.	.
Template Conservation
Template Sequence		K	K	S	V	W	I	F	G	G	D	G	W	A	Y	D	I	G	Y	G	G	L	D	H	V	L	A	S	G	E	D	V	N	V	F	V	M	D	T	E	V	Y	S	N	T	G	G	Q	S	S	K	A	T	P	T	G	A	V	A	K	F	A	A	A	G	K	R	T	G	K	K	D	L	A	R	M	V	M	T	Y	G
Template Known Secondary structure																T	T	T										T	T		S									S	S	B	T	T	T	T		B			T	T	S		T	T			B	B	T	B	T	T			S	S											T	T	S
Template Predicted Secondary structure
Template SS confidence
		954	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.
		511	.	.	.		.	.	.				.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.
Predicted Secondary structure						.				.	.	.
Query SS confidence						.				.	.	.
Query Sequence		G	V	G	Y	.	N	V	T	.	.	.	T	T	D	E	L	R	H	A	L	T	T	G	I	Q	S	R	K	P	T	I	I	N	V	V	I
Query Conservation						.				.	.	.
Alig confidence						.				.	.	.
Template Conservation
Template Sequence		Y	V	Y	V	A	T	V	S	M	G	Y	S	K	Q	Q	F	L	K	V	L	K	E	A	E	S	F	P	G	P	S	L	V	I	A	Y	A
Template Known Secondary structure		S	S							T	T	T															S	S	S
Template Predicted Secondary structure
Template SS confidence
		1034	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions