Job Description P0AFI0 Confidence 100.00% Date Thu Jan 5 11:26:22 GMT 2012 Rank 34 Aligned Residues 169 % Identity 20% Template d1pvda2 SCOP info Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Pyruvate oxidase and decarboxylase Pyr module Resolution 2.30

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		Q	M	T	D	G	M	H	I	I	V	E	A	L	K	Q	N	N	I	D	T	I	Y	G	V	V	G	I	P	V	T	D	M	A	R	H	A	Q	A	E	G	.	I	R	Y	I	G	F	R	H	E	Q	S	A	G	Y	A	A	A	A	S	G	F	L	T	Q	K	P	G	I	C	L	T	V	S	A	P	G	F	L	N
Query Conservation																																										.
Alig confidence																																										.																										.
Template Conservation																																																																				.
Template Sequence		S	E	I	T	L	G	K	Y	L	F	E	R	L	K	Q	V	N	V	N	T	V	F	G	L	P	G	D	F	N	L	S	L	L	D	K	I	Y	E	V	E	G	M	R	W	A	G	N	A	N	E	L	N	A	A	Y	A	A	D	G	Y	A	R	I	K	G	M	.	S	C	I	I	T	T	F	G	V	G	E	L	S
Template Known Secondary structure																	T	T										T	T	T						G	G	G	G	S	T	T							S																	S		.							T	T
Template Predicted Secondary structure																																																																				.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.		.	.	70	.	.	.	.	.	.	.	.	.	80
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	T	A	L	A	N	A	T	V	N	G	F	P	M	I	M	I	S	G	S	S	D	R	A	I	V	D	L	Q	Q	G	D	Y	E	E	L	D	Q	M	N	A	A	K	P	Y	A	K	A	A	F	R	V	N	Q	P	Q	D	L	G	I	A	L	A	R	A	I	R	V	S	V	S	G	R	P	G	G	V	Y	L
Query Conservation
Alig confidence																															.	.																																												.
Template Conservation																															.	.																																												.
Template Sequence		A	L	N	G	I	A	G	S	Y	A	E	H	V	G	V	L	H	V	V	G	V	P	S	I	S	H	H	T	L	.	.	G	N	G	D	F	T	V	F	H	R	M	S	A	N	I	S	E	T	T	A	M	I	T	D	I	A	T	A	P	A	E	I	D	R	C	I	R	T	T	Y	V	T	Q	.	R	P	V	Y	L
Template Known Secondary structure													T																S		.	.	S	S	S		S	S							G	G	G		S								T	T	T																T	.	S
Template Predicted Secondary structure																															.	.																																												.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.			110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.		.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	P	A	N	V	L	A	A	T	M	E	K	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	L	P	A	N	L	V	D	L	N	V	P	A	K
Template Known Secondary structure					T	T	T	T	T	S				G	G
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions