Job Description P0AFI0 Confidence 99.84% Date Thu Jan 5 11:26:22 GMT 2012 Rank 57 Aligned Residues 145 % Identity 19% Template d1pvda1 SCOP info DHS-like NAD/FAD-binding domain DHS-like NAD/FAD-binding domain Pyruvate oxidase and decarboxylase, middle domain Resolution 2.30

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		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		T	I	V	K	V	E	N	P	S	P	A	L	L	P	C	P	K	S	V	T	S	A	I	S	L	L	A	K	A	E	R	P	L	I	I	L	G	K	G	A	A	Y	S	Q	A	D	E	Q	L	R	E	F	I	E	S	A	Q	I	P	F	L	P	M	S	M	A	K	G	I	L	E	D	T	H	P	L	S	A	A	.
Query Conservation																																																																																	.
Alig confidence																																																																																	.
Template Conservation
Template Sequence		T	P	I	D	M	S	L	K	P	N	D	A	E	S	E	K	E	V	I	D	T	I	L	A	L	V	K	D	A	K	N	P	V	I	L	A	D	A	C	C	S	R	H	D	V	K	A	E	T	K	K	L	I	D	L	T	Q	F	P	A	F	V	T	P	M	G	K	G	S	I	S	E	Q	H	P	R	Y	G	G	V
Template Known Secondary structure																															S	S							G	G	G	T	T	T	S	T																			G	G	G	T	T	S	S		T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
									262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	A	A	R	S	F	A	L	A	N	A	D	V	V	M	L	V	G	A	R	L	N	W	L	L	A	H	G	K	K	G	W	A	A	D	T	Q	F	I	Q	L	D	I	E	P	Q	E	I	D	S	N	R	P	I	A	V	P	V	V	G	D	I	A	S	S	M	Q	G	M	L	A	E	L	K
Query Conservation		.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.																					.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.																					.	.	.	.
Template Sequence		Y	V	G	T	L	S	K	P	E	V	K	E	A	V	E	S	A	D	L	I	L	S	V	G	A	L	L	S	D	K	T	K	.	.	.	.	.	.	.	.	.	.	N	I	V	E	F	H	S	D	H	M	K	I	R	N	A	T	F	P	G	V	.	.	.	.	Q	M	K	F	V	L	Q	K	L	L	T	N	I	A
Template Known Secondary structure				S	T	T	S										T		S						S									.	.	.	.	.	.	.	.	.	.							T	T					T	T					T		.	.	.	.
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.																					.	.	.	.
Template SS confidence
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.											.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.					.	.	.	.	.	320	.	.	.	.	.	.	.	.
		335	.	.	.	.	340	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	N	T	F	T	T	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	A	A	K	G	Y	K
Template Known Secondary structure				T	T	T
Template Predicted Secondary structure
Template SS confidence
		339	340	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions