Job Description P0AFI0 Confidence 89.85% Date Thu Jan 5 11:26:22 GMT 2012 Rank 129 Aligned Residues 151 % Identity 15% Template d1ik6a1 SCOP info Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Branched-chain alpha-keto acid dehydrogenase Pyr module Resolution 2.00

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20				.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																						.	.	.																									.									.
Query SS confidence																						.	.	.																									.									.
Query Sequence		M	S	D	Q	L	Q	M	T	D	G	M	H	I	I	V	E	A	L	K	Q	.	.	.	N	N	I	D	T	I	Y	G	V	V	G	I	P	V	T	D	M	A	R	H	A	Q	A	E	.	G	I	R	Y	I	G	F	R	.	H	E	Q	S	A	G	Y	A	A	A	A	S	G	F	L	T	Q	K	P	G	I	C	L
Query Conservation																						.	.	.																									.									.
Alig confidence																						.	.	.															.	.	.	.							.									.
Template Conservation																																							.	.	.	.
Template Sequence		V	A	G	V	V	M	M	A	N	M	A	K	A	I	N	M	A	L	H	E	E	M	E	R	D	E	R	V	V	V	L	G	E	L	V	T	E	.	.	.	.	G	L	Y	E	R	F	G	P	E	R	V	I	D	T	P	L	N	E	G	G	I	L	G	F	A	M	G	M	A	M	A	G	L	K	P	V	A	E	I
Template Known Secondary structure				S																							T	T								T	T	T	.	.	.	.	T							T	T	T						S															T	T
Template Predicted Secondary structure																																							.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.					.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																																																									.
Query SS confidence																																																									.
Query Sequence		T	V	S	A	P	G	F	L	N	G	L	T	A	L	A	N	A	T	V	N	G	F	P	M	I	M	I	S	G	S	S	D	R	A	I	V	D	L	Q	Q	G	D	Y	E	E	L	D	Q	M	N	A	A	K	P	Y	.	A	K	A	A	F	R	V	N	Q	P	Q	D	L	G	I	A	L	A	R	A	I	R	V	S
Query Conservation																																																									.
Alig confidence						.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.																							.	.
Template Conservation						.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.
Template Sequence		Q	F	V	L	.	.	G	A	D	E	L	L	N	H	I	A	K	L	R	Y	K	A	P	L	V	V	R	T	P	V	G	S	P	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	I	F	V	H	T	P	G	L	V	V	V	M	P	S	T	P	Y	N	A	K	G	L	L	K	A	A	I	R	.	.
Template Known Secondary structure						.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T		T	T								S														.	.
Template Predicted Secondary structure						.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.
Template SS confidence
		86	.	.	.			90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.																.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	G	R	P	G	G	V	Y	L	D	L	P	A	N	V	L	A	A	T	M	E	K
Query Conservation
Alig confidence		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	G	D	D	P	V	V	F	L	E	P	K	I	L	Y	R	A	P	R	E	E
Template Known Secondary structure		.	.	.	S	S	S								G	G	G	S	S
Template Predicted Secondary structure		.	.	.
Template SS confidence
					168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions