Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFI0
Confidence44.65%DateThu Jan 5 11:26:22 GMT 2012
Rank195Aligned Residues36
% Identity22%Templated1bf2a3
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   15....20.........30 ... ......40.........
Predicted Secondary structure 





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Query Sequence  VEALKQNNIDTIYGVV. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GIP. . . . . . . . . VTDMARHAQAEGIRYI
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Template Sequence  ASYLASLGVTAVEFLPVQETQNDANDVVPNSDANQNYWGYMTENYFSPDRRYAYNKAAGGPTAEFQAMVQAFHNAGIKVY
Template Known Secondary structure  T

S

B
BS
TTTTSSTT

TT


S


BS
SS
B
GGG
S

STTTT
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   211........220.........230.........240.........250.........260.........270.........280.........290
 
   50
Predicted Secondary structure 
Query SS confidence 
Query Sequence  G
Query Conservation   
Alig confidence 
Template Conservation 
Template Sequence  M
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   291
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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