Job Description P0AFI0 Confidence 99.27% Date Thu Jan 5 11:26:22 GMT 2012 Rank 71 Aligned Residues 109 % Identity 21% Template c3uk1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:transketolase; PDBTitle: crystal structure of a transketolase from burkholderia thailandensis2 with an oxidized cysteinesulfonic acid in the active site Resolution 2.15 Å

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		421	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.																.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.				.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Query Sequence		G	V	M	G	I	G	M	G	Y	A	I	G	A	S	V	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S	P	V	V	A	I	E	G	D	S	A	F	G	F	S	G	M	.	.	.	E	I	E	T	I	C	R	Y	N	L	P	V	T	I	V	I	F	N	N	G	G	I	Y	R	G	D	G
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.			.				.	.	.
Template Conservation																																													.			.
Template Sequence		G	P	L	G	Q	G	L	A	N	A	V	G	M	A	L	G	E	A	L	L	A	A	E	F	N	R	D	D	A	K	I	V	D	H	H	T	Y	V	F	L	G	D	G	.	L	M	.	E	G	I	S	H	E	A	C	S	L	A	G	T	L	K	L	N	K	L	I	A	L	Y	D	D	N	G	I	S	I	D	G	D
Template Known Secondary structure			S	T	T																						B	T	T	B															.			.	S													T	T		T	T									S			T	T
Template Predicted Secondary structure																																													.			.
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.		.	.		.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		483	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.				.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.
Predicted Secondary structure																																				.	.	.
Query SS confidence																																				.	.	.
Query Sequence		V	D	L	S	G	A	G	A	P	S	P	T	D	L	L	H	H	A	R	Y	D	K	L	M	D	A	F	R	G	V	G	Y	N	V	.	.	.	T	T	T	D	E	L	R	H	A	L	T	T	G	I	Q	S	R	K	P	T	I	I	N	V	V	I
Query Conservation																																				.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.																						.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	V	.	.	.	.	.	.	.	.	.	.	.	N	W	F	H	D	D	T	P	K	R	F	E	A	Y	G	W	N	V	I	P	N	V	N	G	H	D	V	D	A	I	D	A	A	I	A	K	A	K	R	S	D	K	P	S	L	I	C	C	K	T
Template Known Secondary structure		G	G	.	.	.	.	.	.	.	.	.	.	.	G	T												T	T									T	T													T	T		S	S
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		213	.												.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions