Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFI0
Confidence59.31%DateThu Jan 5 11:26:22 GMT 2012
Rank163Aligned Residues144
% Identity8%Templatec3qc3B_
PDB info PDB header:isomeraseChain: B: PDB Molecule:d-ribulose-5-phosphate-3-epimerase; PDBTitle: crystal structure of a d-ribulose-5-phosphate-3-epimerase (np_954699)2 from homo sapiens at 2.20 a resolution
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20...... ...30.........40.........50.........60.........70.........80....
Predicted Secondary structure 






..















Query SS confidence 



















. .

























































Query Sequence  MTDGMHIIVEALKQNNIDTI. . YGVVGIPVTDMARHAQAEGIRYIGFRHEQSAGYAAAASGFLTQKPGICLTVSAPGFLN
Query Conservation     
   
   
   

  
..

 

     
   
    
  
    
  
   
 
 

 

   

  
 


  
Alig confidence 



















..

























































Template Conservation          
     



 
 

                 
    
     
  
         
 
       
  
  
Template Sequence  XVSKPEQWVKPXAVAGANQYTFHLEATENPGALIKDIRENGXKVGLAIKPGTSVEYLAPWANQIDXALVXTVEPGFGGQK
Template Known Secondary structure 
S
T
SGGG
S
TT

TTS
GGGGTTTGGGSSSS
TT
SS

Template Predicted Secondary structure 


































Template SS confidence 















































































   72.......80.........90.........100.........110.........120.........130.........140.........150.
 
   85... .90...... ...100.... .....110.........120.........130.........140.........150.......
Predicted Secondary structure  ....

.


..



















Query SS confidence 



. . . .







.







. .




















































Query Sequence  GLTA. . . . LANATVNG. FPMIMISG. . SSDRAIVDLQQGDYEELDQMNAAKPYAKAAFRVNQPQDLGIALARAIRVSVSG
Query Conservation   
  ....
  
    . 


 
 
..              
  

  
     
    
         
  
   
   
Alig confidence 



....







.







..
























........



















Template Conservation          
           
   


    
      


 






  
........ 

      
          
Template Sequence  FXEDXXPKVHWLRTQFPSLDIEVDGGVGPDTVHKCAEAGANXIVSGSAIXRS. . . . . . . . EDPRSVINLLRNVCSEAAQK
Template Known Secondary structure 

GGG
TT
SS
STTTT



T
........S
Template Predicted Secondary structure 
















........


Template SS confidence 















































































   152.......160.........170.........180.........190.........200... ......210.........220...
 
   158
Predicted Secondary structure 
Query SS confidence 
Query Sequence  R
Query Conservation   
Alig confidence 
Template Conservation 
Template Sequence  R
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   224
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions