Job Description P0AFI0 Confidence 82.34% Date Thu Jan 5 11:26:22 GMT 2012 Rank 142 Aligned Residues 103 % Identity 20% Template c3c2qA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized conserved protein; PDBTitle: crystal structure of conserved putative lor/sdh protein2 from methanococcus maripaludis s2 Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		231	.	.	.	.	.	.	.	.	240	.	.	.			.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.			.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure															.	.																				.	.
Query SS confidence															.	.																				.	.
Query Sequence		L	R	E	F	I	E	S	A	Q	I	P	F	L	.	.	P	M	S	M	A	K	G	I	L	E	D	T	H	P	L	S	A	A	A	.	.	A	R	S	F	A	L	A	N	A	D	V	V	M	L	V	G	A	R	L	N	W	L	L	A	H	G	K	K	G	W	A	A	D	T	Q	F	I	Q	L	D	I	E	P	Q
Query Conservation															.	.																				.	.
Alig confidence															.	.																				.	.																										.	.
Template Conservation																																																															.	.
Template Sequence		I	X	Y	Q	C	I	K	N	N	I	P	Y	V	L	A	G	S	I	R	D	D	G	P	I	P	D	V	I	T	D	S	X	V	A	Q	D	K	X	R	T	T	V	X	D	K	K	X	V	I	X	L	S	T	L	L	H	S	V	A	T	G	.	.	N	L	X	P	S	Y	I	K	T	V	C	V	D	I	Q	P	S
Template Known Secondary structure									T	T									T	T		S	S			T	T		B															T	T		S						S										.	.	T	T			T	T	S							S
Template Predicted Secondary structure																																																															.	.
Template SS confidence
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360			.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
		307	.					.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure				.	.	.	.
Query SS confidence				.	.	.	.
Query Sequence		E	I	.	.	.	.	D	S	N	R	P	I	A	V	P	V	V	G	D	I	A	S	S	M	Q	G	M	L	A	E	L	K	Q
Query Conservation				.	.	.	.
Alig confidence				.	.	.	.
Template Conservation
Template Sequence		T	V	T	K	L	X	D	R	G	T	S	Q	A	I	G	V	V	T	D	V	G	V	F	L	V	L	L	L	K	E	L	E	R
Template Known Secondary structure									T			S	S						S
Template Predicted Secondary structure
Template SS confidence
		378	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions