Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFI0
Confidence100.00%DateThu Jan 5 11:26:22 GMT 2012
Rank20Aligned Residues517
% Identity18%Templatec2vbgB_
PDB info PDB header:lyaseChain: B: PDB Molecule:branched-chain alpha-ketoacid decarboxylase; PDBTitle: the complex structure of the branched-chain keto acid2 decarboxylase (kdca) from lactococcus lactis with 2r-1-3 hydroxyethyl-deazathdp
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.... .....50.........60.........70.........80....
Predicted Secondary structure 













.









Query SS confidence 






































.







































Query Sequence  QMTDGMHIIVEALKQNNIDTIYGVVGIPVTDMARHAQAE. GIRYIGFRHEQSAGYAAAASGFLTQKPGICLTVSAPGFLN
Query Conservation      
   
   
   

  


 

     
   
   . 
  
    
  
   
 
 

 

   

  
 


  
Alig confidence 






































.





















.
















Template Conservation     
 

 
   
   

  


 

     
  

     
  
    
  
   
 


 .
     
  
 


  
Template Sequence  LMYTVGDYLLDRLHELGIEEIFGVPGDYNLQFLDQIISREDMKWIGNANELNASYMADGYAR. TKKAAAFLTTFGVGELS
Template Known Secondary structure 


BTT




GGG
SS

SS.S
TT
Template Predicted Secondary structure 















.





Template SS confidence 















































































  
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions