Job Description P0AFI0 Confidence 31.44% Date Thu Jan 5 11:26:22 GMT 2012 Rank 246 Aligned Residues 89 % Identity 21% Template c2fugC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:nadh-quinone oxidoreductase chain 3; PDBTitle: crystal structure of the hydrophilic domain of respiratory complex i2 from thermus thermophilus Resolution 3.30 Å

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		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250								.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure																																																									.	.	.	.	.	.	.															.	.	.	.
Query SS confidence																																																									.	.	.	.	.	.	.															.	.	.	.
Query Sequence		P	C	P	K	S	V	T	S	A	I	S	L	L	A	K	A	E	R	P	L	I	I	L	G	K	G	A	A	Y	S	Q	A	D	E	Q	L	R	E	F	I	E	S	A	Q	I	P	F	L	P	M	S	M	A	K	G	.	.	.	.	.	.	.	I	L	E	D	T	H	P	L	S	A	A	A	A	R	.	.	.	.
Query Conservation																																																									.	.	.	.	.	.	.															.	.	.	.
Alig confidence																																																									.	.	.	.	.	.	.															.	.	.	.
Template Conservation
Template Sequence		E	G	S	E	M	V	A	K	A	K	E	A	W	E	K	A	K	N	P	V	L	I	L	G	A	G	V	L	Q	D	T	V	A	A	E	R	A	R	L	L	A	E	R	A	K	V	L	A	M	T	P	A	A	N	A	R	G	L	E	A	M	G	V	L	P	G	A	K	G	A	S	W	D	E	P	G	A	L	Y	A
Template Known Secondary structure																		S	S							S	G	G	G																							S	S	T	T						T	T	T		S			S	S	S			S	S					S	S
Template Predicted Secondary structure
Template SS confidence
		485	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.
									265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	S	F	A	L	A	N	A	D	V	V	M	L	V	G	A	R	L	N	W	L
Query Conservation		.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	Y	G	F	V	P	P	E	E	A	L	K	G	K	R	F	V	V	M	H	L	S	H	L	H	P	L
Template Known Secondary structure				S	S								T	T		S							S	S			T	T
Template Predicted Secondary structure
Template SS confidence
		567	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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