Job Description P0AFI0 Confidence 100.00% Date Thu Jan 5 11:26:22 GMT 2012 Rank 6 Aligned Residues 539 % Identity 19% Template c2djiA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:pyruvate oxidase; PDBTitle: crystal structure of pyruvate oxidase from aerococcus2 viridans containing fad Resolution 1.60 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.			.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																																				.	.
Query SS confidence																																				.	.
Query Sequence		T	D	G	M	H	I	I	V	E	A	L	K	Q	N	N	I	D	T	I	Y	G	V	V	G	I	P	V	T	D	M	A	R	H	A	.	.	Q	A	E	G	I	R	Y	I	G	F	R	H	E	Q	S	A	G	Y	A	A	A	A	S	G	F	L	T	Q	K	P	G	I	C	L	T	V	S	A	P	G	F	L	N	G
Query Conservation																																				.	.
Alig confidence																																				.	.
Template Conservation
Template Sequence		I	N	I	G	L	A	V	M	K	I	L	E	S	W	G	A	D	T	I	Y	G	I	P	S	G	T	L	S	S	L	M	D	A	M	G	E	E	E	N	N	V	K	F	L	Q	V	K	H	E	E	V	G	A	M	A	A	V	M	Q	S	K	F	G	G	N	L	G	V	T	V	G	S	G	G	P	G	A	S	H	L
Template Known Secondary structure															T	T										T	T	T					T	T	S	S	S	T	T									S	S														T	T										T	T					T	T
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	A	L	A	N	A	T	V	N	G	F	P	M	I	M	I	S	G	S	S	D	R	A	I	V	D	L	Q	Q	G	D	Y	E	E	L	D	Q	M	N	A	A	K	P	Y	A	K	A	A	F	R	V	N	Q	P	Q	D	L	G	I	A	L	A	R	A	I	R	V	S	V	S	G	R	P	G	G	V	Y	L	D
Query Conservation
Alig confidence																													.	.																																													.
Template Conservation																													.	.																																													.
Template Sequence		I	N	G	L	Y	D	A	A	M	D	N	I	P	V	V	A	I	L	G	S	R	P	Q	R	E	L	N	.	.	M	D	A	F	Q	E	L	N	Q	N	P	M	Y	D	H	I	A	V	Y	N	R	R	V	A	Y	A	E	Q	L	P	K	L	V	D	E	A	A	R	M	A	I	A	K	R	.	G	V	A	V	L	E
Template Known Secondary structure												T										S		G	G	G	T	T	.	.	T	T		T	T										T	T		S							S	G	G	G															T	T	.	S
Template Predicted Secondary structure																													.	.																																													.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.			.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.		.	.	.	160	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	A	N	V	L	A	A	T	M	E	K	D	E	A	L	T	T	I	V	K	V	E	N	P	S	P	A	L	L	P	C	P	K	S	V	T	S	A	I	S	L	L	A	K	A	E	R	P	L	I	I	L	G	K	G	A	A	Y	S	Q	A	D	E	Q	L	R	E	F	I	E	S	A	Q	I	P	F	L	P	M
Query Conservation
Alig confidence																														.																																	.	.
Template Conservation																														.																																	.	.
Template Sequence		V	P	G	D	F	A	K	V	E	I	D	N	D	Q	W	Y	S	S	A	N	S	L	R	K	Y	A	P	I	.	A	P	A	A	Q	D	I	D	A	A	V	E	L	L	N	N	S	K	R	P	V	I	Y	A	G	I	G	T	M	G	H	G	.	.	P	A	V	Q	E	L	A	R	K	I	K	A	P	V	I	T	T
Template Known Secondary structure				T	T	G	G	G					G	G	G					G	G	G								.																T		S	S							G	G	G	T	T			.	.											T
Template Predicted Secondary structure																														.																																	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.			.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.								.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.
Query Sequence		S	M	A	K	G	I	L	E	D	T	H	P	L	S	A	A	.	.	.	.	.	.	.	A	A	R	S	F	A	L	A	N	A	D	V	V	M	L	V	G	A	R	L	N	W	L	L	A	H	G	K	K	G	W	A	A	D	T	Q	F	I	Q	L	D	I	E	P	Q	E	I	D	S	N	R	P	I	A	V	P	V
Query Conservation																		.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.																													.	.
Template Conservation																																																					.	.
Template Sequence		G	K	N	F	E	T	F	E	W	D	F	E	A	L	T	G	S	T	Y	R	V	G	W	K	P	A	N	E	T	I	L	E	A	D	T	V	L	F	A	G	S	N	F	P	F	S	E	V	E	G	T	.	.	F	R	N	V	D	N	F	I	Q	I	D	I	D	P	A	M	L	G	K	R	H	H	A	D	V	A	I
Template Known Secondary structure		T	T		G	G	G	S		T	T		T	T	B				S	S	S	S	S												S						S				T	T	T	T	T	T	T	T	.	.	T	T	T		S							S		G	G	G	T	T	S	S	S			S
Template Predicted Secondary structure																																																					.	.
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290			.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	D	I	A	S	S	M	Q	G	M	L	A	E	L	K	Q	N	T	F	T	T	P	L	V	W	R	D	I	L	N	I	H	K	Q	Q	N	A	Q	K	M	H	E	K	L	S	T	D	T	Q	P	L	N	Y	F	N	A	L	S	A	V	R	D	V	L	R	E	N	Q	D	I	Y	L	V	N	E	G	A	N	T
Query Conservation
Alig confidence																							.	.	.																																													.
Template Conservation																							.	.	.																																													.
Template Sequence		L	G	D	A	A	L	A	I	D	E	I	L	N	K	V	D	A	V	E	E	S	.	.	.	A	W	W	T	A	N	L	K	N	I	A	N	W	R	E	Y	I	N	M	L	E	T	K	E	E	G	D	L	Q	F	Y	Q	V	Y	N	A	I	N	N	H	A	D	E	D	.	A	I	Y	S	I	D	V	G	N	S	T
Template Known Secondary structure			S													S							.	.	.																						T			S	S	B														S		T	T	.							S	S
Template Predicted Secondary structure																							.	.	.																																													.
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.				.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.		.	.	.	.	.	.	.	390	.	.	.
		399	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.		.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.
Predicted Secondary structure																																								.
Query SS confidence																																								.
Query Sequence		L	D	N	A	R	N	I	I	D	M	Y	K	P	R	R	R	L	D	C	G	T	W	G	V	M	G	I	G	M	G	Y	A	I	G	A	S	V	T	.	S	G	S	P	V	V	A	I	E	G	D	S	A	F	G	F	S	G	M	E	I	E	T	I	C	R	Y	N	L	P	V	T	I	V	I	F	N	N	G	G	I
Query Conservation																																								.
Alig confidence							.																																	.
Template Conservation							.
Template Sequence		Q	T	S	I	R	.	H	L	H	M	T	P	K	N	M	W	R	T	S	P	L	F	A	T	M	G	I	A	I	P	G	G	L	G	A	K	N	T	Y	P	D	R	Q	V	W	N	I	I	G	D	G	A	F	S	M	T	Y	P	D	V	V	T	N	V	R	Y	N	M	P	V	I	N	V	V	F	S	N	T	E	Y
Template Known Secondary structure			G	G	G	G	.	T					T	T	S							S	S			T	T														T	T	S															G	G	G							T	T											S	B
Template Predicted Secondary structure							.
Template SS confidence
		394	.	.	.	.		.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.
		478	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.				.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.
Predicted Secondary structure																																																								.	.	.
Query SS confidence																																																								.	.	.
Query Sequence		Y	R	G	D	G	V	D	L	S	G	A	G	A	P	S	P	T	D	L	L	H	H	A	R	Y	D	K	L	M	D	A	F	R	G	V	G	Y	N	V	T	T	T	D	E	L	R	H	A	L	T	T	G	I	Q	.	.	.	S	R	K	P	T	I	I	N	V	V	I	D	P	A	A	G	T	E	S	G	H	I	T
Query Conservation																																																								.	.	.
Alig confidence																	.																																							.	.	.																		.
Template Conservation																	.																																																											.
Template Sequence		A	F	I	K	N	K	Y	E	D	T	N	K	N	L	F	.	G	V	D	F	T	D	V	D	Y	A	K	I	A	E	A	Q	G	A	K	G	F	T	V	S	R	I	E	D	M	D	R	V	M	A	E	A	V	A	A	N	K	A	G	H	T	V	V	I	D	C	K	I	T	Q	D	R	P	I	.	P	V	E	T	L
Template Known Secondary structure		T											S				.	S		B													T	T	S							B																	T	T											S					.		T	T	S
Template Predicted Secondary structure																	.																																																											.
Template SS confidence
		473	.	.	.	.	.	.	480	.	.	.	.	.	.	.		.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.		.	.	.	.	550
		555	.	.	.	.	560	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	N	P	K	Q	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	L	D	S	K	L	Y
Template Known Secondary structure		T	T		T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		551	.	.	.	.	.	.