Job Description P0AFI0 Confidence 100.00% Date Thu Jan 5 11:26:22 GMT 2012 Rank 5 Aligned Residues 550 % Identity 22% Template c1yi1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:acetolactate synthase; PDBTitle: crystal structure of arabidopsis thaliana acetohydroxyacid synthase in2 complex with a sulfonylurea herbicide, tribenuron methyl Resolution 2.90 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		T	D	G	M	H	I	I	V	E	A	L	K	Q	N	N	I	D	T	I	Y	G	V	V	G	I	P	V	T	D	M	A	R	H	A	Q	A	E	.	G	I	R	Y	I	G	F	R	H	E	Q	S	A	G	Y	A	A	A	A	S	G	F	L	T	Q	K	P	G	I	C	L	T	V	S	A	P	G	F	L	N	G	L
Query Conservation																																							.
Alig confidence																																							.
Template Conservation
Template Sequence		R	K	G	A	D	I	L	V	E	A	L	E	R	Q	G	V	E	T	V	F	A	Y	P	G	G	A	S	M	E	I	H	Q	A	L	T	R	S	S	S	I	R	N	V	L	P	R	H	E	Q	G	G	V	F	A	A	E	G	Y	A	R	S	S	G	K	P	G	I	C	I	A	T	S	G	P	G	A	T	N	L	V
Template Known Secondary structure														T	T	T										G	G	G									T		S	S							S	S																S	S								T	T					T	T
Template Predicted Secondary structure
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	L	A	N	A	T	V	N	G	F	P	M	I	M	I	S	G	S	S	D	R	A	I	V	D	L	Q	Q	G	D	Y	E	E	L	D	Q	M	N	A	A	K	P	Y	A	K	A	A	F	R	V	N	Q	P	Q	D	L	G	I	A	L	A	R	A	I	R	V	S	V	S	G	R	P	G	G	V	Y	L	D	L
Query Conservation
Alig confidence																				.	.
Template Conservation																				.	.
Template Sequence		S	G	L	A	D	A	L	L	D	S	V	P	L	V	A	I	T	G	.	.	Q	V	P	R	R	M	I	G	T	D	A	F	Q	E	T	P	I	V	E	V	T	R	S	I	T	K	H	N	Y	L	V	M	D	V	E	D	I	P	R	I	I	E	E	A	F	F	L	A	T	S	G	R	P	G	P	V	L	V	D	V
Template Known Secondary structure											T									.	.				G	G	G	T	T	S			T	T									G	G	G	S	S								G	G	G														S	S	S
Template Predicted Secondary structure																				.	.
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.			.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	N	V	L	A	A	T	M	E	K	D	E	A	L	T	T	I	V	K	V	E	N	P	S	P	A	L	L	P	C	P	K	S	V	T	S	A	I	S	L	L	A	K	A	E	R	P	L	I	I	L	G	K	G	A	A	Y	S	Q	A	D	E	Q	L	R	E	F	I	E	S	A	Q	I	P	F	L	P	M	S
Query Conservation
Alig confidence																																																												.	.
Template Conservation																																																												.	.
Template Sequence		P	K	D	I	Q	Q	Q	L	A	I	P	N	W	E	Q	A	M	R	L	P	G	Y	M	S	R	M	P	K	P	P	E	D	S	H	L	E	Q	I	V	R	L	I	S	E	S	K	K	P	V	L	Y	V	G	G	G	C	L	N	.	.	S	S	D	E	L	G	R	F	V	E	L	T	G	I	P	V	A	S	T	L
Template Known Secondary structure														T	T											T	S																		T		S	S							G	G	G	T	T	.	.																				T
Template Predicted Secondary structure																																																												.	.
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.			.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.							.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure																		.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.
Query Sequence		M	A	K	G	I	L	E	D	T	H	P	L	S	A	A	A	.	.	.	.	.	.	A	R	S	F	A	L	A	N	A	D	V	V	M	L	V	G	A	R	L	N	W	L	L	A	H	G	K	K	G	W	A	A	D	T	Q	F	I	Q	L	D	I	E	P	Q	E	I	D	S	N	R	P	I	A	V	P	V	V	G
Query Conservation																		.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.
Template Conservation
Template Sequence		M	G	L	G	S	Y	P	D	D	E	L	S	L	H	M	L	G	M	H	G	T	V	Y	A	N	Y	A	V	E	H	S	D	L	L	L	A	F	G	V	R	F	D	D	R	V	T	G	K	L	E	A	F	A	S	R	A	K	I	V	H	I	D	I	D	S	A	E	I	G	K	N	K	T	P	H	V	S	V	C	G
Template Known Secondary structure		T	T	T	T	S					T	T						S	T	T	S										T		S						S									S	S	G	G	G	T	T	T	T	S							S		G	G	G	T	T	S	S	S			S					S
Template Predicted Secondary structure
Template SS confidence
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	A	S	S	M	Q	G	M	L	A	E	L	K	Q	N	T	F	T	T	P	L	V	W	R	D	I	L	N	I	H	K	Q	Q	N	A	Q	K	M	H	E	K	L	S	T	D	T	Q	P	L	N	Y	F	N	A	L	S	A	V	R	D	V	L	R	E	N	Q	D	I	Y	L	V	N	E	G	A	N	T	L	D
Query Conservation
Alig confidence																					.																																															.
Template Conservation																					.																																															.
Template Sequence		D	V	K	L	A	L	Q	G	M	N	K	V	L	E	N	R	A	E	E	.	L	K	L	D	F	G	V	W	R	N	E	L	N	V	Q	K	Q	K	F	P	L	S	F	K	T	F	G	E	A	I	P	P	Q	Y	A	I	K	V	L	D	E	L	T	D	G	K	.	A	I	I	S	T	G	V	G	Q	H	Q	M	W
Template Known Secondary structure																	T				.																			S								T	T																T	T		.	S						S	S
Template Predicted Secondary structure																					.																																															.
Template SS confidence
		414	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.		.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.		.	480	.	.	.	.	.	.	.	.	.	490	.
		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.		.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		N	A	R	N	I	I	D	M	Y	K	P	R	R	R	L	D	C	G	T	W	G	V	M	G	I	G	M	G	Y	A	I	G	A	S	V	T	.	S	G	S	P	V	V	A	I	E	G	D	S	A	F	G	F	S	G	M	E	I	E	T	I	C	R	Y	N	L	P	V	T	I	V	I	F	N	N	G	G	I	Y	R
Query Conservation																																						.
Alig confidence					.																																	.
Template Conservation					.
Template Sequence		A	A	Q	.	F	Y	N	Y	K	K	P	R	Q	W	L	S	S	G	G	L	G	A	M	G	F	G	L	P	A	A	I	G	A	S	V	A	N	P	D	A	I	V	V	D	I	D	G	D	G	S	F	I	M	N	V	Q	E	L	A	T	I	R	V	E	N	L	P	V	K	V	L	L	L	N	N	Q	H	L	G	M
Template Known Secondary structure					.	S				S	S	S	S	S						S	S			T	T														T	T	S														T	T	T								T	T											S	B
Template Predicted Secondary structure					.
Template SS confidence
		492	.	.		.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570
		480	.	.	.	.	.	.	.	.	.	490	.	.									.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.
Predicted Secondary structure															.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.
Query Sequence		G	D	G	V	D	L	S	G	A	G	A	P	S	.	.	.	.	.	.	.	.	P	T	D	L	L	H	H	A	R	Y	D	K	L	M	D	A	F	R	G	V	G	Y	N	V	T	T	T	D	E	L	R	H	A	L	T	T	G	I	Q	S	R	K	P	T	I	I	N	V	V	I	D	P	A	A	G	T	E	S	G
Query Conservation															.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	M	Q	W	E	D	R	F	Y	K	A	N	R	A	H	T	F	L	G	D	P	A	Q	E	D	E	I	F	P	N	M	L	L	F	A	A	A	C	G	I	P	A	A	R	V	T	K	K	A	D	L	R	E	A	I	Q	T	M	L	D	T	P	G	P	Y	L	L	D	V	I	C	P	H	Q	E	H	V	L	P	M
Template Known Secondary structure										S	T	T			S	S		B		S		G	G	G	T	T	S		S	S									T	T									G	G	G											S	S	S										T	T					S	B
Template Predicted Secondary structure
Template SS confidence
		571	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650
		552	.	.	.	.	.	.	.	560	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	I	T	K	L	N	P	K	Q	V	A	G	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	P	S	G	G	T	F	N	D	V	I	T	E
Template Known Secondary structure				T	T			G	G	G		B
Template Predicted Secondary structure
Template SS confidence
		651	.	.	.	.	.	.	.	.	660	.	.	.