Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFI0
Confidence100.00%DateThu Jan 5 11:26:22 GMT 2012
Rank4Aligned Residues531
% Identity22%Templatec1powA_
PDB info PDB header:oxidoreductase(oxygen as acceptor)Chain: A: PDB Molecule:pyruvate oxidase; PDBTitle: the refined structures of a stabilized mutant and of wild-type2 pyruvate oxidase from lactobacillus plantarum
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20.........30.........40.... .....50.........60.........70.........80.....
Predicted Secondary structure 











..









Query SS confidence 




































. .








































Query Sequence  TDGMHIIVEALKQNNIDTIYGVVGIPVTDMARHAQAE. . GIRYIGFRHEQSAGYAAAASGFLTQKPGICLTVSAPGFLNG
Query Conservation    
   
   
   

  


 

     
   
   .. 
  
    
  
   
 
 

 

   

  
 


  
 
Alig confidence 




































..








































Template Conservation 
 

  
   
   

  


 

     
  

      
  
    
  

  
 



 

   
   




  
 
Template Sequence  ILAGAAVIKVLEAWGVDHLYGIPGGSINSIMDALSAERDRIHYIQVRHEEVGAMAAAADAKLTGKIGVCFGSAGPGGTHL
Template Known Secondary structure  TT




GGGTTTTS
SSSS

TTTT
Template Predicted Secondary structure 























Template SS confidence 















































































   11........20.........30.........40.........50.........60.........70.........80.........90
 
   86...90.........100.........110.........120.........130.........140.........150.........160.....
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  LTALANATVNGFPMIMISGSSDRAIVDLQQGDYEELDQMNAAKPYAKAAFRVNQPQDLGIALARAIRVSVSGRPGGVYLD
Query Conservation 
  
  
     


 
 
              
  

  
     
    
         
  
   
     


 
 
Alig confidence 


















..



















































.





Template Conservation     
  
     


 
 
..            
  

        
    
         
  
   
    .


 
 
Template Sequence  MNGLYDAREDHVPVLALIG. . QFGTTGMNMDTFQEMNENPIYADVADYNVTAVNAATLPHVIDEAIRRAYAHQ. GVAVVQ
Template Known Secondary structure  TT

..

TTTTTS

TT



TTT


SSST.S
Template Predicted Secondary structure 



..



















.

Template SS confidence 















































































   91........100......... 110.........120.........130.........140.........150.........160. ......
 
   166...170.........180.........190.........200.........210.........220.........230.........240.....
Predicted Secondary structure 







































Query SS confidence 















































































Query Sequence  LPANVLAATMEKDEALTTIVKVENPSPALLPCPKSVTSAISLLAKAERPLIILGKGAAYSQADEQLREFIESAQIPFLPM
Query Conservation 

 
                               
      
  

 



 
       
   
  


    

  
Alig confidence 














.












































..
















Template Conservation 

 
           .                   
      
  
 




 
 
   
 ..  
  


 

 

  
Template Sequence  IPVDLPWQQIPAEDW. YASANSYQTPLLPEPDVQAVTRLTQTLLAAERPLIYYGIGARKAG. . KELEQLSKTLKIPLMST
Template Known Secondary structure  TTGGGSGGG
.


GGG









T
SS
GGGGGG..T


Template Predicted Secondary structure 












.






















..






Template SS confidence 















































































   168.170.........180.. .......190.........200.........210.........220....... ..230.........240....
 
   246...250.........260. ........270.........280.........290.........300.........310........
Predicted Secondary structure 









.......































Query SS confidence 















. . . . . . .
























































Query Sequence  SMAKGILEDTHPLSAA. . . . . . . AARSFALANADVVMLVGARLNWLLAHGKKGWAADTQFIQLDIEPQEIDSNRPIAVPV
Query Conservation      
          
.......      
  

 

 

                    
 

 
             
Alig confidence 















.......



























..


























Template Conservation     

     

   
  
          
  

 

 

           ..       
 

 
             
Template Sequence  YPAKGIVADRYPAYLGSANRVAQKPANEALAQADVVLFVGNNYPFAEVSKA. . FKNTRYFLQIDIDPAKLGKRHKTDIAV
Template Known Secondary structure  GGGTTSS
TT
TTB



SSS


SS


TTTT..TTT
S
S
GGGTTSSS

S
Template Predicted Secondary structure 



























..













Template SS confidence 















































































   245....250.........260.........270.........280.........290..... ....300.........310.........320..
 
   319320.........330.........340.........350.........360.........370.........380.........390........
Predicted Secondary structure 























Query SS confidence 















































































Query Sequence  VGDIASSMQGMLAELKQNTFTTPLVWRDILNIHKQQNAQKMHEKLSTDTQPLNYFNALSAVRDVLRENQDIYLVNEGANT
Query Conservation    
    
  
   
                                             
   
         
 
   
Alig confidence 

















...














































.










Template Conservation    
    
  
   
   ...                              
        
       . 


 
 
   
Template Sequence  LADAQKTLAAILAQVSER. . . ESTPWWQANLANVKNWRAYLASLEDKQEGPLQAYQVLRAVNKIAEPD. AIYSIDVGDIN
Template Known Secondary structure 
S
T



...


T

SSB



TT.

SS
Template Predicted Secondary structure 



...

















.




Template SS confidence 















































































   323......330.........340 .........350.........360.........370.........380....... ..390........
 
   399400.........410.........420.........430...... ...440.........450.........460.........470.......
Predicted Secondary structure 











.














Query SS confidence 





































.








































Query Sequence  LDNARNIIDMYKPRRRLDCGTWGVMGIGMGYAIGASVT. SGSPVVAIEGDSAFGFSGMEIETICRYNLPVTIVIFNNGGI
Query Conservation                        
 

  
  






.    

 
 




     

 

    
 
 


 

   
Alig confidence 




.































.








































Template Conservation       .                  

  
  






 
   

   




     

 

    


 


 

 
 
Template Sequence  LNANR. HLKLTPSNRHITSNLFATMGVGIPGAIAAKLNYPERQVFNLAGDGGASMTMQDLATQVQYHLPVINVVFTNCQY
Template Known Secondary structure  .



TT



SS

TTT
TTS
GGGTT


SB
Template Predicted Secondary structure  .




























Template SS confidence 















































































   399400... ......410.........420.........430.........440.........450.........460.........470.......
 
   478.480.........490.........500.........510.........520.........530. ........540.........550.
Predicted Secondary structure 




























..













Query SS confidence 





















































. .



















Query Sequence  YRGDGVDLSGAGAPSPTDLLHHARYDKLMDAFRGVGYNVTTTDELRHALTTGIQ. . SRKPTIINVVIDPAAGTESG
Query Conservation                         
    
 
 
     
    

  

  
  ..  

 



 


       
Alig confidence 





















































..



















Template Conservation 
                      

  

 
 
     
    

  

  
 
     
 



 

        
Template Sequence  GFIKDEQEDTNQNDFIGVEFNDIDFSKIADGVHMQAFRVNKIEQLPDVFEQAKAIAQHEPVLIDAVITGDRPLPAE
Template Known Secondary structure 
SS


SSB




TT

BGGGTTTS








TT
Template Predicted Secondary structure 


































Template SS confidence 











































































   478.480.........490.........500.........510.........520.........530.........540.........550...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions