Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFI0
Confidence33.18%DateThu Jan 5 11:26:22 GMT 2012
Rank234Aligned Residues36
% Identity22%Templatec1bf2A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:isoamylase; PDBTitle: structure of pseudomonas isoamylase
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   15....20.........30 ... ......40.........
Predicted Secondary structure 





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Query Sequence  VEALKQNNIDTIYGVV. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GIP. . . . . . . . . VTDMARHAQAEGIRYI
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Template Sequence  ASYLASLGVTAVEFLPVQETQNDANDVVPNSDANQNYWGYMTENYFSPDRRYAYNKAAGGPTAEFQAMVQAFHNAGIKVY
Template Known Secondary structure  T

S

B
BS
TTTTSSTT

TT


S


BS
SS
B
GGG
S

STTTT
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   211........220.........230.........240.........250.........260.........270.........280.........290
 
   50
Predicted Secondary structure 
Query SS confidence 
Query Sequence  G
Query Conservation   
Alig confidence 
Template Conservation 
Template Sequence  M
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   291
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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