Return to main results Retrieve Phyre Job Id

Job DescriptionP0A7E1
Confidence100.00%DateThu Jan 5 11:05:27 GMT 2012
Rank6Aligned Residues319
% Identity39%Templated1uuma_
SCOP infoTIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases
Resolution2.3

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10. ........20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure  .
































Query SS confidence 









.




































































Query Sequence  YYPFVRKALF. QLDPERAHEFTFQQLRRITGTPFEALVRQKVPAKPVNCMGLTFKNPLGLAAGLDKDGECIDALGAMGFG
Query Conservation          
 .    
        
       
   
       
 
   
     






              
 
Alig confidence 









.












.







.


.









































Template Conservation   
  
   
   
           .  
  
 
.   .      
 
   
     

 



              
 
Template Sequence  YAEYLMPGLQRLLDPESAHRLAVR. VTSLGLLP. RAT. FQDSDMLEVKVLGHKFRNPVGIAAGFDKNGEAVDGLYKLGFG
Template Known Secondary structure 
S
.TT
S
.


.



GGG
TTSSS
TTSSTTSSSTT
S
Template Predicted Secondary structure 




.




.


.






















Template SS confidence 















































































   38.40.........50.........60. ........ 70.. .......80.........90.........100.........110....
 
   81........90.........100.........110.........120.........130. ........140.........150..
Predicted Secondary structure 






















........








Query SS confidence 


















































. . . . . . . .




















Query Sequence  SIEIGTVTPRPQPGNDKPRLFRLVDAEGLINRMGFNNLGVDNLVENVKKAH. . . . . . . . YDGVLGINIGKNKDTPVEQGK
Query Conservation   
   


     
   

   
        
 

   
            ........    
   
            
Alig confidence 


















































........














..



Template Conservation       

          

              
    
                       

  

      ..    
Template Sequence  FVEVGSVTPQPQEGNPRPRVFRLPEDQAVINRYGFNSHGLSVVEHRLRARQQKQAQLTADGLPLGINLGKNKTS. . EDAA
Template Known Secondary structure 
SS
B

S
S

GGGT




B

TTTT




TT
..S
Template Predicted Secondary structure 

































..
Template SS confidence 















































































   115....120.........130.........140.........150.........160.........170.........180........ .190..
 
   153......160.........170.........180.........190.........200.........210.........220.........230..
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  DDYLICMEKIYAYAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPDLSEEELIQVAD
Query Conservation   
           

 
 

  

             
                      

 


            
 
Alig confidence 






























...........





































Template Conservation               

 
 

 
 
       ...........        
  

     

 


            
 
Template Sequence  ADYAEGVRTLGPLADYLVVNVSSQGKTELRH. . . . . . . . . . . LLSKVLQERDALKGTRKPAVLVKIAPDLTAQDKEDIAS
Template Known Secondary structure  GGG
SS



...........TSSSS



S


Template Predicted Secondary structure 
















...........








Template SS confidence 















































































   193......200.........210.........220... ......230.........240.........250.........260.
 
   233......240.........250.........260.........270.........280.........290.........300.........310..
Predicted Secondary structure 








































Query SS confidence 















































































Query Sequence  SLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGRLPIIGVGGIDSVIAAREKIAAGA
Query Conservation       




 
 
                 

 

      

  
  
       



  


  
 

 
 
  

Alig confidence 















































































Template Conservation       
  

   
                 

 

    
 

  
  
       



  


  
 

   
  

Template Sequence  VARELGIDGLIVTNTTVSRPVGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRIPIIGVGGVSSGQDALEKIQAGA
Template Known Secondary structure  T




BS


TT


GGGGS
SGGGTTT
S
SS

ST
Template Predicted Secondary structure 








































Template SS confidence 















































































   271........280.........290.........300.........310.........320.........330.........340.........350
 
   313......320.........330......
Predicted Secondary structure 





Query SS confidence 























Query Sequence  SLVQIYSGFIFKGPPLIKEIVTHI
Query Conservation 
 
 
 
     

     
  

Alig confidence 























Template Conservation    
 



    
   
  
  

Template Sequence  SLVQLYTALIFLGPPVVVRVKREL
Template Known Secondary structure  S
T
Template Predicted Secondary structure 




Template SS confidence 























   351........360.........370....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions