|   |
67 | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | |
. | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | |
|
130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |
|
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|
|  |  |  |  |  |
|
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|
| . |
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|  |  |  |  |  |  |
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|  |  |  |  |  |
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|
|  |  |  |  |  |  |  |  |  |  |  |  | . | . |
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|  |  |  |  |  |  |
|
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|
Query SS confidence |   |
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| . |
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| . |
. |
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|
Query Sequence |   |
D | G | E | C | I | D | A | L | G | A | M | G | F | G | S | I | E | I | G | T | V | T | P | R | P | Q | P | . |
G | N | D | K | P | R | L | F | R | L | V | D | A | E | G | L | I | N | R | M | G | F | N | N | L | G | V | D | N | L | V | E | N | V | K | K | . |
. |
A | H | Y | D | G | V | L | G | I | N | I | G | K | N |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |   |   |
|
|
|   |   |   |   |   | . |
|   |   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   | . | . |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
Alig confidence |   |
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| . |
| . | . | . | . | . | . | . | . | . |
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| . | . | . | . | . | . | . | . |
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| . | . |
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| . |
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|
Template Conservation |   |
|   |   |
|
|   |   |   |   |   |
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|   |
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|   |   |
|
|   |   |   |
|   |
|   |
|
| . | . | . | . | . | . | . | . | . |   |
|
|   |   |   |   |
| . | . | . | . | . | . | . | . |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|
|
| . |
|   |
|   |
Template Sequence |   |
N | A | N | H | A | L | L | A | Q | R | A | G | Y | Q | A | I | Y | L | S | G | G | G | V | A | A | G | S | L | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
L | P | D | L | G | I | S | T | . |
. |
. |
. |
. |
. |
. |
. |
L | D | D | V | L | T | D | I | R | R | I | T | D | V | C | P | L | P | L | L | V | . |
D | A | D | I |
Template Known Secondary structure |   |
S |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  |
|  |  |  |  |  |  | T | T | S |
| . | . | . | . | . | . | . | . | . |
|
| S | S | S |
| S |
| . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| S |
|  |  |  | . |  |
| T | T |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |
|
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|
|  |  |  |  |
|
|  |  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . |
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| . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  | . |  |
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Template SS confidence |   |
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  |   |
27 | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | |
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. | . | . | . | 60 | . | . | . | |
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. | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | |
. | . | . | . |
  |
  |   |
144 | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | |
|
. | 220 | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
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|  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  | . | . |
|
|
|
Query SS confidence |   |
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| . |
. |
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|
Query Sequence |   |
K | D | T | P | V | E | Q | G | K | D | D | Y | L | I | C | M | E | K | I | Y | A | Y | A | G | Y | I | A | I | N | I | S | S | P | N | T | P | G | L | R | T | L | Q | Y | G | E | A | L | D | D | L | L | T | A | I | K | N | K | Q | N | D | L | Q | A | M | H | H | K | Y | V | P | I | A | V | K | I | . |
. |
A | P | D |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|
| . | . |   |   |   |
Alig confidence |   |
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| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
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|
| . | . |
|
|
|
Template Conservation |   |
|
|
|   |   |   |   |   |
|   |
|   |
|   |   |   |   |   |
|
|
|   |
|
|   |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |   |
|   |   |   |   |   |   |   |
|   |
|
|
|
|
|   |   |   |
Template Sequence |   |
G | F | G | S | S | A | F | N | V | A | R | T | V | K | S | I | A | K | A | G | A | A | A | L | H | I | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
D | Q | V | A | I | V | S | K | E | E | M | V | D | R | I | R | A | A | V | D | A | R | T | D | P | N | F | V | I | M | A | R | T | D | A | L | A | V |
Template Known Secondary structure |   |
| S | S | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
| B |
|
| B |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S | S | T | T | S |  |  |  |  |  |  |
|  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
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|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |
|
Template SS confidence |   |
|
|
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  |   |
89 | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | |
|
|
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|
|
. | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . |
  |
  |   |
222 | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | |
|
|
. | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
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|  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
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|
|  |  |  |  |  | . | . | . |
|
|
|
Query SS confidence |   |
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| . |
. |
. |
|
|
|
Query Sequence |   |
L | S | E | E | E | L | I | Q | V | A | D | S | L | V | R | H | N | I | D | G | V | I | A | T | N | T | T | L | D | R | S | L | V | Q | G | M | K | N | C | D | Q | T | G | G | L | S | G | R | P | L | Q | L | K | S | T | E | I | I | R | R | L | S | L | E | L | N | G | R | L | P | I | I | G | V | . |
. |
. |
G | G | I |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|
|
|
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |   |   |   |   |   |
|
|   |   |
|   |   |
|   |   |   |   |   |   |   |
|
|
|
|   |   | . | . | . |
|
|
|
Alig confidence |   |
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| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
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| . | . |
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|
| . | . | . |
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|
|
Template Conservation |   |
  |
|   |   |
|
|
|   |
|
|   |
|
|   |   |
|
|
|
|   |
|   |
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . |   |   |
|   |   |   |   |   |   |   |   |
|   |
Template Sequence |   |
E | G | L | E | A | A | L | D | R | A | Q | A | Y | V | D | A | G | A | D | M | L | F | P | E | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
I | T | E | L | S | M | Y | R | R | F | A | D | V | A | . |
. |
Q | V | P | I | L | A | N | I | T | E | F | G | A |
Template Known Secondary structure |   |
 |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |
| S | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  | . | . |
| S |
| B |  |  |  |
|
| S | S | S | S |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |
| . | . |
|
|
|  |  |  |  |  |
|
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|
Template SS confidence |   |
|
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|
  |   |
165 | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | |
|
|
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|
190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | |
|
. | . | . | . | . | . | 210 | . | . | . | . | . | . |
  |
  |   |
299 | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
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|
Query Sequence |   |
D | S | V | I | A | A | R | E | K | I | A | A | G | A | S | L | V | Q | I | Y | S | G | F | I | F | K | G | P | P | L | I | K | E | I | V | T | H | I |
Query Conservation |   |
  |   |
|   |
|
|   |
|   |
|   |   |
|
|
|   |
|   |
|   |
|   |   |   |   |   |
|
|   |   |   |   |   |
|   |   |
|
|
Alig confidence |   |
|
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|
Template Conservation |   |
  |
|   |   |
|   |   |   |
|   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |
|
Template Sequence |   |
T | P | L | F | T | T | D | E | L | R | S | A | H | V | A | M | A | L | Y | P | L | S | A | F | R | A | M | N | R | A | A | E | K | V | Y | T | V | L |
Template Known Secondary structure |   |
S |
|
|
|
|  |  |  |  |  |  | T | T |
|
|  |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |
|
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