Job Description P0A7E1 Confidence 72.33% Date Thu Jan 5 11:05:27 GMT 2012 Rank 337 Aligned Residues 178 % Identity 13% Template d1svda1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 1.80

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		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140					.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure																											.	.	.	.
Query SS confidence																											.	.	.	.
Query Sequence		N	N	L	G	V	D	N	L	V	E	N	V	K	K	A	H	Y	D	G	V	L	G	I	N	I	.	.	.	.	G	K	N	K	D	T	P	V	E	Q	G	K	D	D	Y	L	I	C	M	E	K	I	Y	A	Y	A	G	Y	I	A	I	N	I	S	S	P	N	T	P	G	L	R	T	L	Q	Y	G	E	A	L	D
Query Conservation																											.	.	.	.
Alig confidence																.	.										.	.	.	.																			.	.	.	.	.	.																			.	.	.	.	.	.	.
Template Conservation																.	.																																.	.	.	.	.	.																			.	.	.	.	.	.	.
Template Sequence		P	P	H	G	I	Q	V	E	R	D	K	M	N	K	.	.	Y	G	R	P	L	L	G	C	T	I	K	P	K	L	G	L	S	A	K	N	Y	G	R	A	V	Y	E	C	L	R	G	.	.	.	.	.	.	G	L	D	F	T	K	D	D	E	N	I	N	S	Q	P	F	M	R	.	.	.	.	.	.	.	W	R
Template Known Secondary structure			S	S										T		.	.		S	S								S		S	S	S																T	.	.	.	.	.	.	T		S						T	T		S	S	B	T	T	B		.	.	.	.	.	.	.
Template Predicted Secondary structure																.	.																																.	.	.	.	.	.																			.	.	.	.	.	.	.
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.			.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.							.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.								.	.
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	L	T	A	I	K	N	K	Q	N	D	L	Q	A	M	H	H	K	Y	V	P	I	A	V	K	I	A	P	D	L	S	E	E	E	L	I	Q	V	A	D	S	L	V	R	H	N	I	D	G	V	I	A	T	N	T	T	L	D	R	S	L	V	Q	G	M	K	N	C	D	Q	T	G	G	L	S	G	R	P	L
Query Conservation
Alig confidence																																	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	R	F	L	F	V	Q	D	A	T	E	T	A	E	A	Q	T	G	E	R	K	G	H	Y	L	N	V	T	A	P	T	.	P	E	E	M	Y	K	R	A	E	F	A	K	E	I	G	A	P	I	I	M	H	D	Y	I	T	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																			S	S											S	S	.															T								T	T	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.		.	290	.	.	.	.													.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310		.	.	.	.	.	.	.	.	.	320				.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure																			.							.	.	.	.	.	.	.	.	.	.	.	.																	.											.	.	.
Query SS confidence																			.							.	.	.	.	.	.	.	.	.	.	.	.																	.											.	.	.
Query Sequence		Q	L	K	S	T	E	I	I	R	R	L	S	L	E	L	N	G	.	R	L	P	I	I	G	.	.	.	.	.	.	.	.	.	.	.	.	V	G	G	I	D	S	V	I	A	A	R	E	K	I	A	A	.	G	A	S	L	V	Q	I	Y	S	G	.	.	.	F	I	F	K	G	P	P	L	I	K	E	I	V	T
Query Conservation																			.							.	.	.	.	.	.	.	.	.	.	.	.																	.											.	.	.
Alig confidence		.	.	.	.														.							.	.	.	.	.	.	.	.	.	.	.	.					.												.											.	.	.					.
Template Conservation		.	.	.	.																																					.																														.
Template Sequence		.	.	.	.	F	T	A	N	T	G	L	A	K	W	C	Q	D	N	G	V	L	L	H	I	H	R	A	M	H	A	V	I	D	R	N	P	N	H	G	I	.	H	F	R	V	L	T	K	I	L	R	L	S	G	G	D	H	L	H	T	G	T	V	V	G	K	L	E	G	D	.	R	A	S	T	L	G	W	I	D
Template Known Secondary structure		.	.	.	.															T								T	T						S		T	T	S	S		.															S							S	T	T	S		G	G	G	.
Template Predicted Secondary structure		.	.	.	.																																					.																														.
Template SS confidence
						267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.		.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.		.	.	.	.	.	.	.	.	340
		335	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		341	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions