Job Description P0A7E1 Confidence 100.00% Date Thu Jan 5 11:05:27 GMT 2012 Rank 13 Aligned Residues 277 % Identity 16% Template d1goxa_ SCOP info TIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases Resolution 2.00

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.								.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.
Query Sequence		D	P	E	R	A	H	E	F	T	F	Q	Q	L	R	R	I	T	G	T	P	F	E	A	L	V	R	Q	K	V	P	A	K	P	V	N	C	M	G	L	T	F	K	N	P	L	G	L	A	A	.	.	.	.	.	.	.	G	L	D	K	D	G	E	C	I	D	A	L	G	A	M	G	F	G	S	I	E	I	G	T
Query Conservation																																																			.	.	.	.	.	.	.
Alig confidence																						.																													.	.	.	.	.	.	.																				.
Template Conservation																						.																																																							.
Template Sequence		E	D	Q	W	T	L	A	E	N	R	N	A	F	S	R	I	L	F	R	P	.	R	I	L	I	D	V	T	N	I	D	M	T	T	T	I	L	G	F	K	I	S	M	P	I	M	I	A	P	T	A	M	Q	K	M	A	H	P	E	G	E	Y	A	T	A	R	A	A	S	A	A	G	T	I	M	.	T	L	S	S
Template Known Secondary structure		T	T										G	G	G	G						.			S				S			B						T	T				S	S	S							S		G	G	G	T		T	T												T	T				.				T
Template Predicted Secondary structure																						.																																																							.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.		.	.	.	.
		87	.	.	90	.					.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure							.	.	.	.
Query SS confidence							.	.	.	.
Query Sequence		V	T	P	R	P	.	.	.	.	Q	P	G	N	D	K	P	R	L	F	R	L	V	D	A	E	G	L	I	N	R	M	G	F	N	N	L	G	V	D	N	L	V	E	N	V	K	K	A	H	Y	D	G	V	L	G	I	N	I	G	K	N	K	D	T	P	V	E	Q	G	K	D	D	Y	L	I	C	M	E	K	I
Query Conservation							.	.	.	.
Alig confidence							.	.	.	.																		.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.
Template Sequence		W	A	T	S	S	V	E	E	V	A	S	T	G	P	G	I	R	F	F	Q	L	Y	V	Y	K	D	.	.	.	.	.	.	.	.	R	N	V	V	A	Q	L	V	R	R	A	E	R	A	G	F	K	A	I	A	L	T	V	D	T	P	R	L	G	R	R	E	A	D	I	K	N	R	.	.	.	.	.	.	.	.
Template Known Secondary structure		T		S	S							T	T												B	S	S	.	.	.	.	.	.	.	.														T	T									S		S	S										T	T	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.									.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	A	Y	A	G	Y	I	A	I	N	I	S	S	P	N	T	P	G	L	R	T	L	Q	Y	G	E	A	L	D	D	L	L	T	A	I	K	N	K	Q	N	D	L	Q	A	M	H	H	K	Y	V	P	I	A	V	K	I	A	P	D	L	S	E	E	E	L	I	Q	V	A	D	S	L	V	R	H	N	I	D	G	V
Query Conservation
Alig confidence		.	.														.	.	.																																						.	.	.	.	.	.
Template Conservation		.	.														.	.	.																																						.	.	.	.	.	.
Template Sequence		.	.	F	V	L	P	P	F	L	T	L	K	N	F	E	.	.	.	G	I	D	L	G	L	S	S	Y	V	A	G	Q	I	D	R	S	L	S	W	K	D	V	A	W	L	Q	T	I	T	S	L	P	I	L	V	K	.	.	.	.	.	.	G	V	I	T	A	E	D	A	R	L	A	V	Q	H	G	A	A	G	I
Template Known Secondary structure		.	.					T	T				G	G	G	S	.	.	.	S	S											T	B		T	T															S						.	.	.	.	.	.				S										T	T		S
Template Predicted Secondary structure		.	.														.	.	.																																						.	.	.	.	.	.
Template SS confidence
				172	.	.	.	.	.	.	.	180	.	.	.	.				.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.							.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	T	N	T	T	L	D	R	S	L	V	Q	G	M	K	N	C	D	Q	T	G	G	L	S	G	R	P	L	Q	L	K	S	T	E	I	I	R	R	L	S	L	E	L	N	G	R	L	P	I	I	G	V	G	G	I	D	S	V	I	A	A	R	E	K	I	A	A	G	A	S	L	V	Q	I	Y	S	G	F	I
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	V	S	N	H	G	A	R	Q	L	D	Y	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	A	T	I	M	A	L	E	E	V	V	K	A	A	Q	G	R	I	P	V	F	L	D	G	G	V	R	R	G	T	D	V	F	K	A	L	A	L	G	A	A	G	V	F	I	G	R	P	V	V
Template Known Secondary structure						G	G	G	T	S	S	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														T	T	T	S	S						S	S			S											T		S
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.																		.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
		323					.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.
Query SS confidence			.	.	.	.
Query Sequence		F	.	.	.	.	K	G	P	P	L	I	K	E	I	V	T	H	I
Query Conservation			.	.	.	.
Alig confidence			.	.	.	.
Template Conservation
Template Sequence		F	S	L	A	A	E	G	E	A	G	V	K	K	V	L	Q	M	M
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions