Return to main results Retrieve Phyre Job Id

Job DescriptionP0A7E1
Confidence99.20%DateThu Jan 5 11:05:27 GMT 2012
Rank85Aligned Residues88
% Identity26%Templatec3tdmD_
PDB info PDB header:de novo proteinChain: D: PDB Molecule:computationally designed two-fold symmetric tim-barrel PDBTitle: computationally designed tim-barrel protein, halfflr
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   227..230.........240.........250.........260.........270.........280.........290.........300......
Predicted Secondary structure 





































Query SS confidence 















































































Query Sequence  LIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGRLPIIGVGGIDSVIAARE
Query Conservation      
      




 
 
                 

 

      

  
  
       



  


  
 

 
Alig confidence 






























..................










..

















Template Conservation    
 
      

  
    
   
   
  ..................   
  
    .. 



  


 
  
   
Template Sequence  LRDWVVEVEKRGAGEILLTSIDRDGTKSGYD. . . . . . . . . . . . . . . . . . TEMIRFVRPLT. . TLPIIASGGAGKMEHFLE
Template Known Secondary structure  TT
SSSS
SSSS


..................GGG
..
S
S


S
Template Predicted Secondary structure 












..................
..







Template SS confidence 















































































   32.......40.........50.........60.. .......70... ......80.........90.
 
   307..310.........320.........330.....
Predicted Secondary structure 







Query SS confidence 




























Query Sequence  KIAAGASLVQIYSGFIFKGPPLIKEIVTH
Query Conservation   
  


 
 
 
     

     
  
Alig confidence 
















.










Template Conservation      
   
 

 
   . 
    

   
Template Sequence  AFLRGADKVSINTAAVE. NPSLITQIAQT
Template Known Secondary structure  TT
S

S.
TTT
Template Predicted Secondary structure 




.
Template SS confidence 




























   92.......100........ .110.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions