Job Description P0A7E1 Confidence 46.74% Date Thu Jan 5 11:05:27 GMT 2012 Rank 405 Aligned Residues 153 % Identity 13% Template c3t07D_ PDB info PDB header:transferase/transferase inhibitor Chain: D: PDB Molecule:pyruvate kinase; PDBTitle: crystal structure of s. aureus pyruvate kinase in complex with a2 naturally occurring bis-indole alkaloid Resolution 3.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure
Query SS confidence
Query Sequence		D	N	L	V	E	N	V	K	K	A	H	Y	D	G	V	L	G	I	N	I	G	K	N	K	D	T	P	V	E	Q	G	K	D	D	Y	L	I	C	M	E	K	I	Y	A	Y	A	G	Y	I	A	I	N	I	S	S	P	N	T	P	G	L	R	T	L	Q	Y	G	E	A	L	D	D	L	L	T	A	I	K	N	K
Query Conservation
Alig confidence																																																					.	.	.	.	.	.
Template Conservation																																																					.	.	.	.	.	.
Template Sequence		K	D	L	I	R	Q	C	N	K	L	G	K	P	V	I	T	A	T	Q	M	L	D	S	M	Q	R	N	P	R	A	T	R	A	E	A	S	D	V	A	N	A	I	Y	D	G	T	D	A	V	M	L	.	.	.	.	.	.	S	G	E	T	A	A	G	L	Y	P	E	E	A	V	K	T	M	R	N	I	A	V	S
Template Known Secondary structure										T	T	T							S	S	S	S	G	G	G	G	T	S	S	S																T		S					.	.	.	.	.	.	S					T		S
Template Predicted Secondary structure																																																					.	.	.	.	.	.
Template SS confidence
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310							.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	N	D	L	Q	A	M	H	H	K	Y	V	P	I	A	V	K	I	A	P	D	L	S	E	E	E	L	I	Q	V	A	D	S	L	V	R	H	N	I	D	G	V	I	A	T	N	T	T	L	D	R	S	L	V	Q	G	M	K	N	C	D	Q	T	G	G	L	S	G	R	P	L	Q	L	K	S	T	E	I	I	R
Query Conservation
Alig confidence																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	E	A	A	Q	D	Y	K	K	L	L	S	D	R	T	K	L	V	E	T	S	L	V	N	A	I	G	I	S	V	A	H	T	A	L	N	L	N	V	K	A	I	V	A	A	T	E	S	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	A
Template Known Secondary structure					T														S				T	T	T														T		S							S	S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.																													.	.
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	S	L	E	L	N	G	R	L	P	I	I	G	V	G	G	I	D	S	V	I	A	A	R	E	K	I	A	A
Query Conservation
Alig confidence																.	.	.
Template Conservation																.	.	.
Template Sequence		R	T	I	S	K	Y	R	P	H	S	D	I	I	A	.	.	.	V	T	P	S	E	E	T	A	R	Q	C	S	I
Template Known Secondary structure						T	T			S	S					.	.	.			S									T	T
Template Predicted Secondary structure																.	.	.
Template SS confidence
		386	.	.	.	390	.	.	.	.	.	.	.	.	.				400	.	.	.	.	.	.	.	.	.	410	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions