Job Description P0A7E1 Confidence 97.07% Date Thu Jan 5 11:05:27 GMT 2012 Rank 185 Aligned Residues 167 % Identity 11% Template c3stgA_ PDB info PDB header:transferase Chain: A: PDB Molecule:2-dehydro-3-deoxyphosphooctonate aldolase; PDBTitle: crystal structure of a58p, del(n59), and loop 7 truncated mutant of 3-2 deoxy-d-manno-octulosonate 8-phosphate synthase (kdo8ps) from3 neisseria meningitidis Resolution 2.20 Å

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		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.																	180	.	.	.
Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	D	N	L	V	E	N	V	K	K	A	H	Y	D	G	V	L	G	I	N	I	G	K	N	K	D	T	P	V	E	Q	G	K	D	D	Y	L	I	C	M	E	K	I	Y	A	Y	A	G	Y	I	A	I	N	I	S	S	P	N	T	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	R	T
Query Conservation																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		C	A	H	Y	V	E	V	T	R	K	L	G	I	P	Y	I	F	K	A	S	F	D	K	P	R	S	S	I	H	S	Y	R	G	V	G	L	E	E	G	L	K	I	F	E	K	V	K	A	E	F	G	I	P	V	I	T	D	V	H	E	P	H	Q	C	Q	P	V	A	E	V	C	D	V	I	Q	L	P	A	F	L
Template Known Secondary structure													T									S			T	T	S		T	T	S				S																										S												S						G	G	G
Template Predicted Secondary structure
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	Y	G	E	A	L	D	D	L	L	T	A	I	K	N	K	Q	N	D	L	Q	A	M	H	H	K	Y	V	P	I	A	V	K	I	A	P	D	L	S	E	E	E	L	I	Q	V	A	D	S	L	V	R	H	N	I	D	G	V	I	A	T	N	T	T	L	D	R	S	L	V	Q	G	M	K	N	C	D	Q	T
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																		.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																		.	.	.	.
Template Sequence		A	R	Q	T	D	L	V	V	A	M	A	K	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	N	V	V	N	I	K	K	P	Q	F	L	S	P	S	Q	M	K	N	I	V	E	K	F	H	E	A	G	N	G	K	L	I	L	C	E	R	G	S	S	F	G	Y	D	N	L	V	V	D	.	.	.	.
Template Known Secondary structure		T	T												.	.	.	.	.	.	.	.	.	.	.	.	.	.										T	T	S		G	G	G											T	T														S	S	S						.	.	.	.
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																		.	.	.	.
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.															.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.							.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.
Query Sequence		G	G	L	S	G	R	P	L	Q	L	K	S	T	E	I	I	R	R	L	S	L	E	L	N	G	R	L	P	I	I	G	V	G	G	I	D	S	V	.	.	.	.	.	.	I	A	A	R	E	K	I	A	A	G	A	S	L	V	Q	I
Query Conservation																																								.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.													.														.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.													.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	M	L	G	F	G	V	M	K	Q	T	C	G	.	N	L	P	V	I	F	D	V	T	H	S	L	G	R	R	A	Q	A	L	D	L	A	L	A	G	M	A	T	R	L	A	G	L	F	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	T										T	T	.	T							T	T	T	T		S	S	G	G	G										T	T			S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.													.
Template SS confidence
														177	.	.	180	.	.	.	.	.	.	.	.		.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions