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Job DescriptionP0A7E1
Confidence98.74%DateThu Jan 5 11:05:27 GMT 2012
Rank104Aligned Residues165
% Identity18%Templatec3ng3A_
PDB info PDB header:lyaseChain: A: PDB Molecule:deoxyribose-phosphate aldolase; PDBTitle: crystal structure of deoxyribose phosphate aldolase from mycobacterium2 avium 104 in a schiff base with an unknown aldehyde
Resolution2.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   120.........130....... ..140.........150.........160.........170.........180..
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Query Sequence  VDNLVENVKKAHYDGVLG. . . . . . . . . . . . . . . . . INIGKNKDTPVEQGKDDYLICMEKIYAYAGYIAINISSPNTPGLR
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Template Sequence  VAALVTEAAELGVYAVCVSPPMVPAAVQAGARVASVAGFPSGKHVSAVKAHEAALAVASGAAEIDMV. IDVGAALAGDL.
Template Known Secondary structure  T
S
GGGT


STTT

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   26...30.........40.........50.........60.........70.........80.........90.. .......100...
 
   183......190.........200.........210.........220... ......230.........240.........250.....
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Query Sequence  TLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPDLS. . . . . . . EEELIQVADSLVRHNIDGVIATNTTLDRSLVQ
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Template Sequence  . . . . . DGVRADIAAVRGAV. . . . . . . . . . GGAVLKVIVESSALLALADEHTLVRVCRAAEDAGADFVKTSTGFHPSGGAS
Template Known Secondary structure  ...............TTS

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   106...110......... 120.........130.........140.........150.........160.........170
 
   256...260.........270.........280.........290.........300.........310.........320.
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Query Sequence  GMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGRLPIIGVGGIDSVIAAREKIAAGASLVQIYSGF
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Template Sequence  . . . . . . . . . . . . . . . . . . . . VRAVALMAEAVGGRLGVKASGGIRTAADALAMLDAGATRLGLSGTR
Template Known Secondary structure  ....................TTSSSS

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   171........180.........190.........200.........210......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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