Job Description P0A7E1 Confidence 99.92% Date Thu Jan 5 11:05:27 GMT 2012 Rank 48 Aligned Residues 262 % Identity 14% Template c3kruC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:nadh:flavin oxidoreductase/nadh oxidase; PDBTitle: crystal structure of the thermostable old yellow enzyme from2 thermoanaerobacter pseudethanolicus e39 Resolution 1.60 Å

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		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.												.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	V	N	C	M	G	L	T	F	K	N	P	L	G	L	A	A	G	L	.	.	.	.	.	.	.	.	.	.	.	D	K	D	G	E	C	I	D	A	L	G	A	M	G	F	G	S	I	E	I	G	T	V	T	P	R	P	Q	P	G	N	D	K	P	R	L	F	R	L	V	D	A	E	G	L	I	N	R	M	G
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.																													.																	.	.	.	.	.
Template Conservation																																																												.																	.	.	.	.	.
Template Sequence		P	L	K	I	K	D	I	T	I	K	N	R	I	M	M	S	P	M	C	M	Y	S	A	S	T	D	G	M	P	N	D	W	H	I	V	H	Y	A	T	R	A	I	G	G	V	G	L	I	M	Q	E	A	T	A	V	E	S	R	.	G	R	I	T	D	H	D	L	G	I	W	N	D	E	Q	V	.	.	.	.	.
Template Known Secondary structure						T	T				S	S	S											S		T	T																	T	T		S									S	S	G	G	.	G		S	S	T	T	S		B		S	S	T				.	.	.	.	.
Template Predicted Secondary structure																																																												.																	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.																												140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.		.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Query Sequence		F	N	N	L	G	V	D	N	L	V	E	N	V	K	K	A	H	Y	D	G	V	L	G	I	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	G	K	N	K	D	T	P	V	E	Q	G	K	D	D	Y	L	I	C	M	E	K	I	.	Y	A	Y	A
Query Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Alig confidence		.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template Conservation		.	.	.
Template Sequence		.	.	.	K	E	L	K	K	I	V	D	I	C	K	A	N	G	A	V	M	G	I	Q	L	A	H	A	G	R	K	C	N	I	S	Y	E	D	V	V	G	P	S	P	I	K	A	G	D	R	Y	K	L	P	R	E	L	S	V	E	E	I	K	S	I	V	K	A	F	G	E	A	A	K	R	A	N	L	A	G	Y
Template Known Secondary structure		.	.	.													T	T											G	G	G				T	T	S					S	S	S			S	S	T	T	S																													T
Template Predicted Secondary structure		.	.	.
Template SS confidence
					81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		167	.	.	170	.	.	.	.										.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220							.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.
Query Sequence		G	Y	I	A	I	N	I	S	.	.	.	.	.	.	.	.	.	S	P	N	T	P	G	L	R	T	L	Q	Y	G	E	A	L	D	D	L	L	T	A	I	K	N	K	Q	N	D	L	Q	A	M	H	H	K	Y	V	P	I	A	V	K	I	A	P	.	.	.	.	.	.	D	L	S	E	E	E	L	I	Q	V	A
Query Conservation										.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.					.																																										.	.	.	.	.	.
Template Conservation																							.
Template Sequence		D	V	V	E	I	H	A	A	H	G	Y	L	I	H	E	F	L	S	P	L	S	.	N	K	R	K	D	E	Y	G	N	S	I	E	N	R	A	R	F	L	I	E	V	I	D	E	V	R	K	N	W	P	E	N	K	P	I	F	V	R	V	S	A	D	D	Y	M	E	G	G	I	N	I	D	M	M	V	E	Y	I
Template Known Secondary structure		S								T	T	S								T	T	T	.					S	T	T	S	S	S					T													T	S		T	T	S											S	S	T	T	S
Template Predicted Secondary structure																							.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.		.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	S	L	V	R	H	N	I	D	G	V	I	A	T	N	T	T	L	D	R	S	L	V	Q	G	M	K	N	C	D	Q	T	G	G	L	S	G	R	P	L	Q	L	K	S	T	E	I	I	R	R	L	S	L	E	L	N	G	R	L	P	I	I	G	V	G	G	I	D	S	V	I	A	A	R	E	K	I	A	A	G
Query Conservation
Alig confidence					.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.
Template Conservation					.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.
Template Sequence		N	M	I	.	K	D	K	V	D	L	I	D	V	S	S	G	G	L	L	N	V	D	I	N	L	Y	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Y	Q	V	K	Y	A	E	T	I	K	K	R	C	.	.	N	I	K	T	S	A	V	G	L	I	T	T	Q	E	L	A	E	E	I	L	S	N	E
Template Known Secondary structure					.	T	T	T		S									S	S								T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T												.	.	T							S	S													T	T
Template Predicted Secondary structure					.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.
Template SS confidence
		237	.	.		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.															.	.	.	.	.	.	.	270	.	.	.	.	.	.			.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
			312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	A	S	L	V	Q	I	Y	S	G	F	I	F	K	G	P	P	L	I	K	E	I	V	T	H
Query Conservation		.
Alig confidence		.													.
Template Conservation															.
Template Sequence		R	A	D	L	V	A	L	G	R	E	L	L	R	.	N	P	Y	W	V	L	H	T	Y	T	S
Template Known Secondary structure		S		S					S						.		T	T							S	S
Template Predicted Secondary structure															.
Template SS confidence
		300	.	.	.	.	.	.	.	.	.	310	.	.		.	.	.	.	.	.	.	320	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions