Job Description P0A7E1 Confidence 99.86% Date Thu Jan 5 11:05:27 GMT 2012 Rank 55 Aligned Residues 274 % Identity 16% Template c3k30B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:histamine dehydrogenase; PDBTitle: histamine dehydrogenase from nocardiodes simplex Resolution 2.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.									.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.
Query Sequence		P	F	E	A	L	V	R	Q	K	V	P	A	K	P	V	N	C	M	G	L	T	F	K	N	P	L	G	L	A	A	G	L	.	.	.	.	.	.	.	.	D	K	D	G	E	C	I	D	A	L	G	A	M	G	F	G	S	I	E	I	G	T	V	T	P	R	P	Q	P	G	N	D	K	P	R	L	F	R	L	V
Query Conservation																																		.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.
Template Sequence		P	Y	D	V	L	F	E	.	.	.	.	.	.	P	V	Q	I	G	P	F	T	T	K	N	R	F	Y	Q	V	P	H	C	N	G	M	G	Y	R	D	P	S	A	Q	A	S	M	R	K	I	K	A	E	G	G	W	S	A	V	C	T	E	Q	V	E	I	H	A	T	S	D	I	A	P	F	I	E	L	R	I	W
Template Known Secondary structure		T	G	G	G	G	G		.	.	.	.	.	.					T	T				S	S	S									S		S	S	S															T	T		S										S	G	G	G			T	T	S						S
Template Predicted Secondary structure									.	.	.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.							.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.																																	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	A	E	G	L	I	N	R	M	G	F	N	N	L	G	V	D	N	L	V	E	N	V	K	K	A	H	Y	D	G	V	L	G	I	N	I	G	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	K	D	T	P	V	E	Q	G	K
Query Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.
Template Sequence		D	D	Q	D	L	.	.	.	.	.	.	.	.	P	A	L	K	R	I	A	D	A	I	H	E	G	G	G	L	A	G	I	E	L	A	H	N	G	M	N	A	P	N	Q	L	S	R	E	T	P	L	G	P	G	H	L	P	V	A	P	D	T	I	A	P	I	Q	A	R	A	M	T	K	Q	D	I	D	D	L	R
Template Known Secondary structure		S	G	G	G		.	.	.	.	.	.	.	.														T											G	G	G				T	T	T							S	S	S					S	S				S
Template Predicted Secondary structure							.	.	.	.	.	.	.	.
Template SS confidence
		84	.	.	.	.									.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		153	.	.	.	.	.	.	160	.	.		.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.										.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure												.																	.	.	.	.	.	.	.	.	.
Query SS confidence												.																	.	.	.	.	.	.	.	.	.
Query Sequence		D	D	Y	L	I	C	M	E	K	I	.	Y	A	Y	A	G	Y	I	A	I	N	I	S	S	P	N	T	.	.	.	.	.	.	.	.	.	P	G	L	R	T	L	Q	Y	G	E	A	L	D	D	L	L	T	A	I	K	N	K	Q	N	D	L	Q	A	M	H	H	K	Y	V	P	I	A	V	K	I	A	P	D	L
Query Conservation												.																	.	.	.	.	.	.	.	.	.
Alig confidence												.																	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	W	H	R	N	A	V	R	R	S	I	E	A	G	Y	D	I	V	Y	V	Y	G	A	H	G	Y	S	G	V	H	H	F	L	S	K	R	Y	N	Q	R	T	D	E	Y	G	G	S	L	E	N	R	M	R	L	L	R	E	L	L	E	D	T	L	D	E	C	A	G	R	A	A	V	A	C	R	I	T	V	E	E
Template Known Secondary structure															T		S								T	T		S								T	T	T					S	T	T	S	S	S					T															S	S	S	S								S
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
								223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	S	E	E	E	L	I	Q	V	A	D	S	L	V	R	H	N	I	D	G	V	I	A	T	N	T	T	L	D	R	S	L	V	Q	G	M	K	N	C	D	Q	T	G	G	L	S	G	R	P	L	Q	L	K	S	T	E	I	I	R	R	L	S	L	E	L	N	G	R	L	P	I	I	G	V	G
Query Conservation		.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.															.																											.	.	.	.	.	.	.	.	.	.	.													.	.
Template Conservation																						.																											.	.	.	.	.	.	.	.	.	.	.													.	.
Template Sequence		E	I	D	G	G	I	T	R	E	D	I	E	G	V	L	R	E	L	G	E	.	L	P	D	L	W	D	F	A	M	G	S	W	E	G	D	S	V	T	S	R	F	A	P	E	G	R	.	.	.	.	.	.	.	.	.	.	.	Q	E	E	F	V	A	G	L	K	K	L	T	.	.	T	K	P	V	V	G	V	G
Template Known Secondary structure			S	T	T	S														T	T	.	S	S	S							S	S					S			T	T	T			T	T	T	.	.	.	.	.	.	.	.	.	.	.	T					T	T	T	G	G	G		.	.	S	S						S
Template Predicted Secondary structure																						.																											.	.	.	.	.	.	.	.	.	.	.													.	.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.		.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.												.	.	.	.	.	.	.	.	290	.	.	.			.	.	.	.	.	.	300	.
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.		.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		G	I	D	S	V	I	A	A	R	E	K	I	A	A	G	.	A	S	L	V	Q	I	Y	S	G	F	I	F	K	G	P	P	L	I	K	E	I	V	T	H
Query Conservation																	.
Alig confidence																	.													.
Template Conservation																														.
Template Sequence		R	F	T	S	P	D	A	M	V	R	Q	I	K	A	G	I	L	D	L	I	G	A	A	R	P	S	I	A	.	D	P	F	L	P	N	K	I	R	D	G
Template Known Secondary structure															T	T	S		S					S						.		T	T								T
Template Predicted Secondary structure																														.
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.		330	.	.	.	.	.	.	.	.	.	340

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions