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Job DescriptionP0A7E1
Confidence86.01%DateThu Jan 5 11:05:27 GMT 2012
Rank286Aligned Residues215
% Identity17%Templatec3fa4D_
PDB info PDB header:lyaseChain: D: PDB Molecule:2,3-dimethylmalate lyase; PDBTitle: crystal structure of 2,3-dimethylmalate lyase, a pep mutase/isocitrate2 lyase superfamily member, triclinic crystal form
Resolution2.18 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   67..70.........80.........90... ......100.........110.........120.........130.........140.....
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Query Sequence  DGECIDALGAMGFGSIEIGTVTPRPQP. GNDKPRLFRLVDAEGLINRMGFNNLGVDNLVENVKKAHYDGVLGINIGKNKD
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Template Sequence  DGLSARVALSAGFDALYMTGAGTAASVHG. . . . . . . . . QADLGICTL. . . . . NDMRANAEMISNISPSTPVIADA. . . . D
Template Known Secondary structure  STTT
S

TS.........S
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   28.30.........40.........50...... ...60..... ....70.........80........ .
 
   146...150.........160.........170.........180.........190.........200.........210.........220..
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Query Sequence  TPVEQGKDDYLICMEKIYAYAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPDL. . .
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Template Sequence  TGYGGPIMVARTTEQYSRSGVAAFHI. . . . EDQVQTKILVDTDTYVTRIRAAVQARQRI. . . . . . GSDIVVIARTDSLQT
Template Known Secondary structure  T
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   90.........100.........110..... ....120.........130.........140.... .....150.........
 
   223......230.........240.........250.........260.........270.........280.........290..... ...
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Query Sequence  . SEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGRLPIIGV. . . GGI
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Template Sequence  HGYEESVARLRAARDAGADVGFLEG. . . . . . . . . . . . . . . . . . . . . . . . . . ITSREMARQVIQDLA. GWPLLLNMVEHGA
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   168.170.........180.........190.. .......200....... ..210.........220
 
   299300.........310.........320.........330......
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Query Sequence  DSVIAAREKIAAGASLVQIYSGFIFKGPPLIKEIVTHI
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Template Sequence  TPSISAAEAKEMGFRIIIFPFAALGPAVAAMREAMEKL
Template Known Secondary structure  S



T
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   221........230.........240.........250........
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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