Job Description P0A7E1 Confidence 76.36% Date Thu Jan 5 11:05:27 GMT 2012 Rank 324 Aligned Residues 193 % Identity 15% Template c2qygC_ PDB info PDB header:unknown function Chain: C: PDB Molecule:ribulose bisphosphate carboxylase-like protein 2; PDBTitle: crystal structure of a rubisco-like protein rlp2 from rhodopseudomonas2 palustris Resolution 3.30 Å

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		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140					.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure																																												.	.	.	.
Query SS confidence																																												.	.	.	.
Query Sequence		R	L	F	R	L	V	D	A	E	G	L	I	N	R	M	G	F	N	N	L	G	V	D	N	L	V	E	N	V	K	K	A	H	Y	D	G	V	L	G	I	N	I	.	.	.	.	G	K	N	K	D	T	P	V	E	Q	G	K	D	D	Y	L	I	C	M	E	K	I	Y	A	Y	A	G	Y	I	A	I	N	I	S
Query Conservation																																												.	.	.	.
Alig confidence																																	.	.										.	.	.	.																			.	.	.	.	.	.
Template Conservation																																	.	.																																.	.	.	.	.	.
Template Sequence		R	L	Q	D	I	R	F	P	E	P	Y	L	A	A	F	D	G	P	R	F	G	I	A	G	V	R	E	R	L	Q	A	.	.	F	D	R	P	I	F	F	G	V	I	K	P	N	I	G	L	P	P	Q	P	F	A	E	L	G	Y	Q	S	W	T	G	.	.	.	.	.	.	G	L	D	I	A	K	D	D	E	M
Template Known Secondary structure														T	T	S				S	S										T		.	.		S	S								S	S		T	T			S														.	.	.	.	.	.	T		S						T	T
Template Predicted Secondary structure																																	.	.																																.	.	.	.	.	.
Template SS confidence
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.			.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.							.	.	.	.	.	.	.	200	.	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.		.	.	.	.	250	.	.	.
Predicted Secondary structure																																																																									.
Query SS confidence																																																																									.
Query Sequence		S	P	N	T	P	G	L	R	T	L	Q	Y	G	E	A	L	D	D	L	L	T	A	I	K	N	K	Q	N	D	L	Q	A	M	H	H	K	Y	V	P	I	A	V	K	I	A	P	D	L	S	E	E	E	L	I	Q	V	A	D	S	L	V	R	H	N	I	D	G	V	I	A	T	.	N	T	T	L	D	R	S	L
Query Conservation																																																																									.
Alig confidence										.	.	.	.	.	.	.																																				.	.																				.		.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.																																				.	.																						.	.	.	.	.	.	.
Template Sequence		L	A	D	V	D	W	C	P	.	.	.	.	.	.	.	L	A	E	R	A	A	L	L	G	D	A	C	R	R	A	S	A	E	T	G	V	P	K	I	Y	L	A	N	I	T	D	E	V	D	R	.	.	L	T	E	L	H	D	V	A	V	A	N	G	A	G	A	L	L	I	N	A	M	.	.	.	.	.	.	.
Template Known Secondary structure				S		T	T	S		.	.	.	.	.	.	.																				S	S												T	T		.	.											T	T										.	.	.	.	.	.	.
Template Predicted Secondary structure										.	.	.	.	.	.	.																																				.	.																						.	.	.	.	.	.	.
Template SS confidence
		203	.	.	.	.	.	.	210								.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.			.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.													.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.																												.	.
Query SS confidence																																									.	.	.	.	.	.	.	.	.	.	.	.																												.	.
Query Sequence		V	Q	G	M	K	N	C	D	Q	T	G	G	L	S	G	R	P	L	Q	L	K	S	T	E	I	I	R	R	L	S	L	E	L	N	G	R	L	P	I	.	.	.	.	.	.	.	.	.	.	.	.	I	G	V	G	G	I	D	S	V	I	A	A	R	E	K	I	A	A	G	A	S	L	V	Q	I	Y	S	.	.
Query Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.																												.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.					.	.	.	.	.	.	.	.	.	.	.	.																												.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	V	G	L	S	A	V	R	M	L	R	K	H	A	.	.	T	V	P	L	I	A	H	F	P	F	I	A	A	F	S	R	L	A	N	Y	G	I	H	S	R	V	M	T	R	L	Q	R	L	A	G	F	D	V	V	I	M	P	G	F	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												T	T		.	.		S							T	T						S		T	T	S															T		S							S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.
Template SS confidence
																					267	.	.	270	.	.	.	.	.	.	.	.	.	280			.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	F	I	F	K	G	P	P	L	I	K	E	I	V	T	H	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	R	M	M	T	P	E	H	E	V	L	D	C	I	R	A	C
Template Known Secondary structure		G	G	G
Template Predicted Secondary structure
Template SS confidence
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions