Return to main results Retrieve Phyre Job Id

Job DescriptionP0A7E1
Confidence56.12%DateThu Jan 5 11:05:27 GMT 2012
Rank375Aligned Residues113
% Identity12%Templatec2oo6A_
PDB info PDB header:isomeraseChain: A: PDB Molecule:putative l-alanine-dl-glutamate epimerase; PDBTitle: crystal structure of putative l-alanine-dl-glutamate epimerase from2 burkholderia xenovorans strain lb400
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   191........200.........210.........220.........230.........240.........250.........260.........270
Predicted Secondary structure 






































Query SS confidence 















































































Query Sequence  DDLLTAIKNKQNDLQAMHHKYVPIAVKIAPDLSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRP
Query Conservation                        

 


            
      




 
 
                 

 

  
Alig confidence 




















































.........................

Template Conservation        
   
 


   
    
 



  
    
      
    
  

.........................

Template Sequence  RKVLRNLRAHLEALRDGAGPDVEILLDLNFNAKPEGYLKILRELADFDLFWVE. . . . . . . . . . . . . . . . . . . . . . . . . ID
Template Known Secondary structure 
SSS
TT
S
TTTS

S.........................

Template Predicted Secondary structure 














.........................

Template SS confidence 















































































   191........200.........210.........220.........230.........240... ..
 
   271........280.........290.........300.........310. ........320.........330....
Predicted Secondary structure 











.




Query SS confidence 








































.






















Query Sequence  LQLKSTEIIRRLSLELNGRLPIIGVGGIDSVIAAREKIAAG. ASLVQIYSGFIFKGPPLIKEIVT
Query Conservation      

  
  
       



  


  
 

 
 
  
.

 
 
 
     

     
  
Alig confidence 

..











..






















.






.
.












Template Conservation    ..       
    .. 



 

          

     

   
. .  



    
  
Template Sequence  SY. . SPQGLAYVRNHS. . PHPISSCETLFGIREFKPFFDANAVDVAIVD. T. IWNGVWQSMKIAA
Template Known Secondary structure 
S..
T
..SS

TT

TT

S
..
Template Predicted Secondary structure 

..

..
















.
.



Template SS confidence 
































































   246. ..250......... 260.........270.........280.........290 . ........300....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions