Job Description P0A7E1 Confidence 99.75% Date Thu Jan 5 11:05:27 GMT 2012 Rank 63 Aligned Residues 257 % Identity 19% Template c2gq8A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:oxidoreductase, fmn-binding; PDBTitle: structure of sye1, an oye homologue from s. ondeidensis, in complex2 with p-hydroxyacetophenone Resolution 1.70 Å

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		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.											.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.
Query Sequence		P	V	N	C	M	G	L	T	F	K	N	P	L	G	L	A	A	.	.	.	.	.	.	.	.	.	.	G	L	D	K	D	G	E	C	I	D	A	L	G	A	M	G	F	G	S	I	E	I	G	T	V	T	P	R	P	Q	P	G	N	D	K	P	R	L	F	R	L	V	D	A	E	G	L	I	N	R	M	G	F
Query Conservation																			.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.																														.																		.	.	.	.	.	.
Template Conservation																																																										.																		.	.	.	.	.	.
Template Sequence		P	I	T	L	G	A	L	T	L	K	N	R	I	V	M	P	P	M	T	R	S	R	A	S	Q	P	G	D	V	A	N	H	M	M	A	I	Y	Y	A	Q	R	A	S	A	G	L	I	V	S	E	G	T	Q	I	S	P	.	T	A	K	G	Y	A	W	T	P	G	I	Y	T	P	E	Q	I	.	.	.	.	.	.
Template Known Secondary structure						T	T				S	S	S												B	T	T	T	T	B												T	T	T	S	S									S	S	G	.	G	G			S	T	T			B	S	S	S					.	.	.	.	.	.
Template Predicted Secondary structure																																																										.																		.	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.																																														.	.	.	.	.	.	.	150
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	N	L	G	V	D	N	L	V	E	N	V	K	K	A	H	Y	D	G	V	L	G	I	N	I	G	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	K	D	T	P	V	E	Q
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.
Template Sequence		.	.	A	G	W	R	I	V	T	E	A	V	H	A	K	G	C	A	I	F	A	Q	L	W	H	V	G	R	V	T	H	P	D	N	I	D	G	Q	Q	P	I	S	S	S	T	L	K	A	E	N	V	K	V	F	V	D	N	G	S	D	E	P	G	F	V	D	V	A	V	P	R	A	M	T	K	A	D	I	A	Q
Template Known Secondary structure		.	.													T	S											T	T	S	S		G	G	G	T	T	T						S	S	S				T	T								S	S	S	S
Template Predicted Secondary structure		.	.
Template SS confidence
				81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.		.	.	.	.	.	.	.	170	.	.	.	.										.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure														.													.	.	.	.	.	.	.	.	.
Query SS confidence														.													.	.	.	.	.	.	.	.	.
Query Sequence		G	K	D	D	Y	L	I	C	M	E	K	I	.	Y	A	Y	A	G	Y	I	A	I	N	I	S	.	.	.	.	.	.	.	.	.	S	P	N	T	P	G	L	R	T	L	Q	Y	G	E	A	L	D	D	L	L	T	A	I	K	N	K	Q	N	D	L	Q	A	M	H	H	K	Y	V	P	I	A	V	K	I	A	P
Query Conservation														.													.	.	.	.	.	.	.	.	.
Alig confidence														.													.	.	.	.	.	.	.	.	.					.																																	.
Template Conservation																																								.																																	.
Template Sequence		V	I	A	D	Y	R	Q	A	A	L	N	A	M	E	A	G	F	D	G	I	E	L	H	A	A	N	G	Y	L	I	N	Q	F	I	D	S	E	A	.	N	N	R	S	D	E	Y	G	G	S	L	E	N	R	L	R	F	L	D	E	V	V	A	A	L	V	D	A	I	G	A	E	.	R	V	G	V	R	L	A	P
Template Known Secondary structure																T	T		S								T	T	S							S	G	G	G	.					S	T	T	S	S	S					T																G	G	.	G							S
Template Predicted Secondary structure																																								.																																	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.		.	230	.	.	.	.	.	.
		221	.										.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.
Query Sequence		D	L	.	.	.	.	.	.	.	.	.	S	E	E	E	L	I	Q	V	A	D	S	L	V	R	H	N	I	D	G	V	I	A	T	N	T	T	L	D	R	S	L	V	Q	G	M	K	N	C	D	Q	T	G	G	L	S	G	R	P	L	Q	L	K	S	T	E	I	I	R	R	L	S	L	E	L	N	G	R	L	P
Query Conservation				.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Template Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Template Sequence		L	T	T	L	N	G	T	V	D	A	D	P	I	L	T	Y	T	A	A	A	A	L	L	N	K	H	R	I	V	Y	L	H	I	A	E	V	D	W	D	D	A	P	D	T	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	S	F	K	R	A	L	R	E	A	Y	.	.	Q	G	V
Template Known Secondary structure		S			T	T	S				S	S																T		S								B	T	T	B						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.		S
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.																				.	.	.	.	.	.	.	.	290	.	.			.	.	.
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.		.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		I	I	G	V	G	G	I	D	S	V	I	A	A	R	E	K	I	A	A	G	.	A	S	L	V	Q	I	Y	S	G	F	I	F	K	G	P	P	L	I	K	E	I	V	T	H	I
Query Conservation																						.
Alig confidence									.													.													.
Template Conservation									.																										.
Template Sequence		L	I	Y	A	G	R	Y	.	N	A	E	K	A	E	Q	A	I	N	D	G	L	A	D	M	I	G	F	G	R	P	F	I	A	.	N	P	D	L	P	E	R	L	R	H	G	Y
Template Known Secondary structure						S	S		.											T	T	S		S											.		T	T								T
Template Predicted Secondary structure									.																										.
Template SS confidence
		296	.	.	.	300	.	.		.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.		.	.	330	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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