|   |
26 | . | . | . | 30 | . | . | . | . | . | |
|
. | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | |
|
|
|
|
. | . | . | . | . | . | . | 60 | . | . | |
. | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
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|
|  | . | . |  |
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|
|  |  |  |  |
|
|  | . | . | . | . | . |  |
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|  |  |  |
|
| . |
|
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|  |  |  |  |  |  |  |  |  |
|
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|
|  |  |  |  |  |
|
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|
Query SS confidence |   |
|
|
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|
| . |
. |
|
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|
| . |
. |
. |
. |
. |
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| . |
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|
Query Sequence |   |
L | R | R | I | T | G | T | P | F | E | . |
. |
A | L | V | R | Q | K | V | P | A | K | P | V | N | C | M | G | L | . |
. |
. |
. |
. |
T | F | K | N | P | L | G | L | A | A | . |
G | L | D | K | D | G | E | C | I | D | A | L | G | A | M | G | F | G | S | I | E | I | G | T | V | T | P | R | P | Q | P | G | N | D | K |
Query Conservation |   |
  |   |   |   |   |   |   |
|   |   | . | . |   |
|   |   |   |   |   |   |   |
|   |
|   |   |   |
|   | . | . | . | . | . |   |   |   |   |
|
|
|
|
|
| . |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |   |   |
|
|
|   |   |   |   |   |
|   |   |   |
Alig confidence |   |
|
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|
| . |
| . | . |
|
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| . | . | . | . | . |
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| . |
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|
| . | . | . | . |
Template Conservation |   |
|
|
|
|   |
|   |
| . |   |   |
|   |   |   |   |   |   |   |
|
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|   |
|   |
|   |   |   |   |   |   |   |
|
|   |
|   |
|   |   |
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   | . | . | . | . |
Template Sequence |   |
F | K | D | V | L | L | R | P | . |
K | R | S | T | L | K | S | R | S | E | V | D | L | T | R | S | F | S | F | R | N | S | K | Q | T | Y | S | G | V | P | I | I | A | A | N | M | D | T | V | G | T | F | E | M | A | K | V | L | C | K | F | S | L | F | T | A | V | H | K | H | Y | S | L | V | Q | W | Q | . |
. |
. |
. |
Template Known Secondary structure |   |
G | G | G |  |  |  |
|
| . |
|
|
|
|
|
|
| G | G | G |
| B |
|
|  |  |  |  |
| T | T | T |
|
|  |  |  |  |  |  |  |  |  |
|
|
| T | T | T | S |
|  |  |  |  |  |  |  |  |  |  | T |  |  |  |  |  |
| T | T | S |
|  |  |  |  |  | . | . | . | . |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
| . |
|
|
|
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|
|
|  |  |  |
|
|
|  |  |  |  |
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|  |  |
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|  |  |
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|  |  |  |
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|  |  |  |  |  |  |  |  |  |
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|  |  |  |
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|  |  |  |  | . | . | . | . |
Template SS confidence |   |
|
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  |   |
12 | . | . | . | . | . | . | . | |
20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | |
|
|
|
  |
  |   |
98 | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
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|  |  |  |  |  |  |
|
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|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
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|
|
Query SS confidence |   |
|
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|
Query Sequence |   |
P | R | L | F | R | L | V | D | A | E | G | L | I | N | R | M | G | F | N | N | L | G | V | D | N | L | V | E | N | V | K | K | A | H | Y | D | G | V | L | G | I | N | I | G | K | N | K | D | T | P | V | E | Q | G | K | D | D | Y | L | I | C | M | E | K | I | Y | A | Y | A | G | Y | I | A | I | N | I | S | S | P | N |
Query Conservation |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |
|
|   |   |
|
|   |
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
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|
| . | . | . | . | . | . | . | . |
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|
Template Conservation |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |
Template Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
E | F | A | G | Q | N | P | D | C | L | E | H | L | A | A | S | S | G | T | G | . |
. |
. |
. |
. |
. |
. |
. |
S | S | D | F | E | Q | L | E | Q | I | L | E | A | I | P | Q | V | K | Y | I | C | L | D | V | A | N | G | Y |
Template Known Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |
| S | G | G | G | S | S |  |  |  |  |  |
| S | S | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T |
|
|  |  |  |  |  |
| S |
| T | T |
Template Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
| . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
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|
|
|
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|
|
|
|
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  |   |
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|
87 | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
. | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . |
  |
  |   |
178 | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
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|
|  |  |  |  |  |
|
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|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
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|
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|
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|
Query SS confidence |   |
|
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|
Query Sequence |   |
T | P | G | L | R | T | L | Q | Y | G | E | A | L | D | D | L | L | T | A | I | K | N | K | Q | N | D | L | Q | A | M | H | H | K | Y | V | P | I | A | V | K | I | A | P | D | L | S | E | E | E | L | I | Q | V | A | D | S | L | V | R | H | N | I | D | G | V | I | A | T | N | T | T | L | D | R | S | L | V | Q | G | M |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|
|
|
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
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| . | . | . | . | . |
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|
Template Conservation |   |
  |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|
|   | . | . | . | . | . |
|   |
|   |
|   |   |   |
|   |   |   |   |   |   |
|
|
|   |
|   |
|   |
|   |
|
|   |   |   |   |   |   |   |   |
Template Sequence |   |
S | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
H | F | V | E | F | V | K | D | V | R | K | R | F | P | Q | H | T | I | M | A | . |
. |
. |
. |
. |
G | N | V | V | T | G | E | M | V | E | E | L | I | L | S | G | A | D | I | I | K | V | G | I | G | P | G | S | V | C | T | T | R | K | K |
Template Known Secondary structure |   |
|  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  | S | T | T | S |  |  |  |  | . | . | . | . | . |  |  |  |
| S |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  |
| S | S |
|
| S | S |
|
|  |  |  |  |
Template Predicted Secondary structure |   |
 |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
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|
|  |  |  | . | . | . | . | . |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
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|
Template SS confidence |   |
|
|
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|
|
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|
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|
|
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  |   |
135 | . | |
|
|
|
|
|
|
|
|
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|
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|
|
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|
|
. | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | |
|
|
|
|
. | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . |
  |
  |   |
258 | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | |
. | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
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|
|
|
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|
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| . |
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|
Query Sequence |   |
K | N | C | D | Q | T | G | G | L | S | G | R | P | L | Q | L | K | S | T | E | I | I | R | R | L | S | L | E | L | . |
N | G | R | L | P | I | I | G | V | G | G | I | D | S | V | I | A | A | R | E | K | I | A | A | G | A | S | L | V | Q | I | Y | S | G | F | I | F |
Query Conservation |   |
  |   |   |   |   |   |
|
|   |
|
|   |   |   |   |   |   |
|
|   |   |
|   |   |
|   |   |   |   | . |   |   |   |
|
|
|
|   |   |
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|
|   |   |
|   |
|
|   |
|   |
|   |   |
|
|
|   |
|   |
|   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
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| . |
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Template Conservation |   |
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Template Sequence |   |
T | G | V | G | Y | P | . |
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Q | L | S | A | V | M | E | C | A | D | A | A | H | G | L | K | G | H | I | I | S | D | G | G | C | S | C | P | G | D | V | A | K | A | F | G | A | G | A | D | F | V | M | L | G | G | M | L | A | G |
Template Known Secondary structure |   |
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| . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  | S |
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| S | S |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  | S | G | G | G | T | T |
Template Predicted Secondary structure |   |
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| . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
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Template SS confidence |   |
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  |   |
192 | . | . | . | . | . | |
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. | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . |
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