Job Description P0A7E1 Confidence 96.20% Date Thu Jan 5 11:05:27 GMT 2012 Rank 215 Aligned Residues 210 % Identity 18% Template c1zcoA_ PDB info PDB header:lyase Chain: A: PDB Molecule:2-dehydro-3-deoxyphosphoheptonate aldolase; PDBTitle: crystal structure of pyrococcus furiosus 3-deoxy-d-arabino-2 heptulosonate 7-phosphate synthase Resolution 2.25 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.							.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure																												.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.
Query Sequence		R	Q	K	V	P	A	K	P	V	N	C	M	G	L	T	F	K	N	P	L	G	L	A	A	G	L	.	.	.	.	.	.	D	K	D	G	E	C	I	D	A	L	G	A	M	G	F	G	S	I	E	I	G	T	V	T	P	R	P	Q	P	G	N	D	K	P	R	L	F	R	L	V	D	A	E	G	L	I	N	R
Query Conservation																												.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.																							.	.												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																								.	.												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	E	Y	D	E	K	T	V	V	K	I	N	D	V	K	F	G	E	G	F	T	I	I	A	G	P	C	S	I	E	S	R	E	Q	I	M	K	V	A	E	F	L	A	E	V	G	I	K	V	L	R	G	G	A	.	.	F	K	P	R	T	S	P	Y	S	F	Q	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	T	T		S							T	T				T	S	S								S	B																	T	T							B	S	.	.	S				S	S	T	T	S			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																								.	.												.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.			.	60	.	.	.	.	.	.	.	.	.
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	G	F	N	N	L	G	V	D	N	L	V	E	N	V	K	K	A	H	Y	D	G	V	L	G	I	N	I	G	K	N	K	D	T	P	V	E	Q	G	K	D	D	Y	L	I	C	M	E	K	I	Y	A	Y	A	G	Y	I	A	I	N	I	S	S	P	N	T	P	G	L	R	T	L	Q	Y	G	E	A	L	D	D
Query Conservation
Alig confidence		.																				.	.										.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.
Template Conservation		.																				.	.										.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.
Template Sequence		.	G	Y	G	E	K	A	L	R	W	M	R	E	A	A	D	E	Y	G	L	.	.	V	T	V	T	E	V	M	D	T	.	.	.	.	.	.	.	.	.	.	.	.	.	R	H	V	E	L	V	A	K	Y	S	D	I	L	Q	I	.	.	.	.	.	.	.	.	G	A	R	N	S	Q	N	F	E	L	L	K	E
Template Known Secondary structure		.			T															T		.	.									G	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G									S					.	.	.	.	.	.	.	.		G	G	G	T	T
Template Predicted Secondary structure		.																				.	.										.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.
Template SS confidence
			70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.			.	90	.	.	.	.	.	.	.														.	.	100	.	.	.	.	.	.	.	.	.	110	.	.									.	.	.	.	.	.	.	120	.	.	.	.	.
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	T	A	I	K	N	K	Q	N	D	L	Q	A	M	H	H	K	Y	V	P	I	A	V	K	I	A	P	D	L	S	E	E	E	L	I	Q	V	A	D	S	L	V	R	H	N	I	D	G	V	I	A	T	N	T	T	L	D	R	S	L	V	Q	G	M	K	N	C	D	Q	T	G	G	L	S	G	R	P	L	Q
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																								.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																								.	.	.	.	.	.	.	.	.	.
Template Sequence		V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	K	V	E	N	P	V	L	L	K	R	G	M	G	N	T	I	Q	E	L	L	Y	S	A	E	Y	I	M	A	Q	G	N	E	N	V	I	L	C	E	R	G	I	R	T	F	E	T	A	T	R	F	T	L	D	I	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S	S	S								T	T															T	T	T											B			S			S	S	S	S	B			T	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		126															.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.							.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.
Query Sequence		L	K	S	T	E	I	I	R	R	L	S	L	E	L	N	G	R	L	P	I	I	G	V	G	G	I	D	S	V	I	A	.	.	.	.	.	.	A	R	E	K	I	A	A	G	A	S	L	V	Q	I
Query Conservation																																	.	.	.	.	.	.
Alig confidence		.	.	.	.											.	.																.	.	.	.	.	.
Template Conservation		.	.	.	.											.	.
Template Sequence		.	.	.	.	S	A	V	P	V	V	K	E	L	S	.	.	H	L	P	I	I	V	D	P	S	H	P	A	G	R	R	S	L	V	I	P	L	A	K	A	A	Y	A	I	G	A	D	G	I	M	V
Template Known Secondary structure		.	.	.	.	T									B	.	.	S	S						S	S	T	T	T		S	G	G	G											T	T		S
Template Predicted Secondary structure		.	.	.	.											.	.
Template SS confidence
						182	.	.	.	.	.	.	.	190	.			.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions