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Job DescriptionP0A7E1
Confidence67.29%DateThu Jan 5 11:05:27 GMT 2012
Rank357Aligned Residues196
% Identity16%Templatec1rldB_
PDB info PDB header:lyase(carbon-carbon)Chain: B: PDB Molecule:ribulose 1,5 bisphosphate carboxylase/oxygenase (large PDBTitle: solid-state phase transition in the crystal structure of ribulose 1,5-2 biphosphate carboxylase(slash)oxygenase
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   99100.........110.........120.........130.........140 .........150.........160.........170....
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Query Sequence  RLFRLVDAEGLINRMGFNNLGVDNLVENVKKAHYDGVLGINI. . . . GKNKDTPVEQGKDDYLICMEKIYAYAGYIAINIS
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Template Sequence  RLEDLRIPPAYVKTFQGPPHGIQVERDKLNK. . YGRPLLGCTIKPKLGLSAKNYGRAVYECLRG. . . . . . GLDFTKDDEN
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   134.....140.........150.........160.... .....170.........180.........190..... ....200.....
 
   175....180.........190.........200.........210.........220.........230.........240.........250....
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Query Sequence  SPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPDLSEEELIQVADSLVRHNIDGVIATNTTLDRSLV
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Template Sequence  VNSQPFMR. . . . . . . WRDRFLFCAEALYKAEAETGEIKGHYLNATAGT. CEEMIKRAVFARELGVPIVMHDYLTGG. . . .
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   206...210... ......220.........230.........240...... ...250.........260.........270...
 
   255....260.........270.........280...... ...290.... .....300.........310.........320
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Query Sequence  QGMKNCDQTGGLSGRPLQLKSTEIIRRLSLEL. NGRLPIIG. . . . . . . . . . . . VGGIDSVIAAREKIAAGASLVQIYSG.
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . FTANTSLAHYCRDNGLLLHIHRAMHAVIDRQKNHGIHFRVLAKALRMSGGDHIHSGTVV
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   274.....280.........290.........300.........310.........320.........330..
 
   321........330......
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Query Sequence  . . FIFKGPPLIKEIVTHI
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Template Sequence  GKLEGE. RDITLGFVDLL
Template Known Secondary structure  SS
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   333..... .340.........
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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