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Job DescriptionP0A7E1
Confidence65.09%DateThu Jan 5 11:05:27 GMT 2012
Rank362Aligned Residues178
% Identity15%Templatec1rcxH_
PDB info PDB header:lyase (carbon-carbon)Chain: H: PDB Molecule:ribulose bisphosphate carboxylase/oxygenase; PDBTitle: non-activated spinach rubisco in complex with its substrate2 ribulose-1,5-bisphosphate
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   99100.........110.........120.........130.........140 .........150.........160.........170....
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Query Sequence  RLFRLVDAEGLINRMGFNNLGVDNLVENVKKAHYDGVLGINI. . . . GKNKDTPVEQGKDDYLICMEKIYAYAGYIAINIS
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Template Sequence  RLEDLRIPVAYVKTFQGPPHGIQVERDKLNK. . YGRPLLGCTIKPKLGLSAKNYGRAVYECLRG. . . . . . GLDFTKDDEN
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   134.....140.........150.........160.... .....170.........180.........190..... ....200.....
 
   175....180.........190.........200.........210.........220.........230.........240..... ....250...
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Query Sequence  SPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPDLSEEELIQVADSLVRHNIDGVIAT. NTTLDRSL
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Template Sequence  VNSQPFMR. . . . . . . WRDRFLFCAEALYKAQAETGEIKGHYLNATAGT. CEDMMKRAVFARELGVPIVMHDYL. . . . . . .
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   206...210... ......220.........230.........240...... ...250.........260.........270
 
   254.....260.........270.........280........ .290.... .....300.........310 .........
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Query Sequence  VQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNG. RLPIIG. . . . . . . . . . . . VGGIDSVIAAREKIAA. GASLVQIYS
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Template Sequence  . . . . . . . . . . . . . . . . . . . TGGFTANTTLSHYCRDNGLLLHIHRAMHAVIDRQKNHGMHFRV. LAKALRLSGGDHIHSGT
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   271........280.........290.........300.........310... ......320.........330
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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