Job Description P0A7E1 Confidence 80.53% Date Thu Jan 5 11:05:27 GMT 2012 Rank 308 Aligned Residues 131 % Identity 15% Template c1kkoB_ PDB info PDB header:lyase Chain: B: PDB Molecule:3-methylaspartate ammonia-lyase; PDBTitle: crystal structure of citrobacter amalonaticus2 methylaspartate ammonia lyase Resolution 1.33 Å

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		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220							.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.
Query Sequence		L	R	T	L	Q	Y	G	E	A	L	D	D	L	L	T	A	I	K	N	K	Q	N	D	L	Q	A	M	H	H	K	Y	V	P	I	A	V	K	I	A	P	.	.	.	.	.	.	D	L	S	E	E	E	L	I	Q	V	A	D	S	L	V	R	H	N	I	D	G	V	I	A	T	N	T	T	L	D	R	S	L	V
Query Conservation																																										.	.	.	.	.	.
Alig confidence																																										.	.	.	.	.	.																											.	.	.	.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.	.	.	.
Template Sequence		E	K	L	G	F	K	G	E	K	L	R	E	Y	V	R	W	L	S	D	R	I	L	S	L	R	S	S	P	R	Y	H	P	T	L	H	I	D	V	Y	G	T	I	G	L	I	F	D	X	D	P	V	R	C	A	E	Y	I	A	S	L	E	K	E	A	Q	G	L	P	L	Y	I	E	.	.	.	.	.	.	.	.
Template Known Secondary structure						T	T	S																			S	S	T	T										T	T						T	T	T												T	T	G	G	G	T	T	S						.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.					.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.				.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.		.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.																	.	.	.																									.
Query SS confidence																			.	.	.	.																	.	.	.																									.
Query Sequence		Q	G	M	K	N	C	D	Q	T	G	G	L	S	G	R	P	L	.	.	.	.	Q	L	K	S	T	E	I	I	R	R	L	S	L	E	L	N	.	.	.	G	R	L	P	I	I	G	V	G	G	I	D	S	V	I	A	A	R	E	K	I	A	A	G	.	A	S	L	V	Q	I	Y	S	G	F	I	F	K	G	P
Query Conservation																			.	.	.	.																	.	.	.																									.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.				.	.	.	.																	.	.	.																									.										.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																													.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	P	V	D	A	G	N	K	P	D	Q	I	R	X	L	T	A	I	T	K	E	L	T	R	L	G	S	G	V	K	I	V	A	D	E	W	C	N	T	Y	Q	D	I	V	D	F	T	D	A	G	S	C	H	X	V	Q	I	K	T	P	.	D	L	G	G	I
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.						S	S																			T									T	T			S										T	T			S						G	G	.	G	G	S	S	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																													.
Template SS confidence
																274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.		.	.	.	.	.
		327	.	.	330	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	I	K	E	I	V	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	N	I	V	D	A	V	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		339	340	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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