Job Description P0A7E9 Confidence 100.00% Date Thu Jan 5 11:05:32 GMT 2012 Rank 30 Aligned Residues 222 % Identity 23% Template c3k4yB_ PDB info PDB header:transferase Chain: B: PDB Molecule:isopentenyl phosphate kinase; PDBTitle: crystal structure of isopentenyl phosphate kinase from m. jannaschii2 in complex with ipp Resolution 2.54 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.							.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																		.																						.	.	.	.	.	.																													.	.	.	.	.	.	.	.
Query SS confidence																		.																						.	.	.	.	.	.																													.	.	.	.	.	.	.	.
Query Sequence		R	I	L	L	K	L	S	G	E	A	L	Q	G	T	E	G	.	F	G	I	D	A	S	I	L	D	R	M	A	Q	E	I	K	E	L	V	E	L	.	.	.	.	.	.	G	I	Q	V	G	V	V	I	G	G	G	N	L	F	R	G	A	G	L	A	K	A	G	M	N	R	V	V	.	.	.	.	.	.	.	.
Query Conservation																		.																						.	.	.	.	.	.																													.	.	.	.	.	.	.	.
Alig confidence																		.																						.	.	.	.	.	.																													.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	T	I	L	K	L	G	G	S	I	L	S	D	K	N	V	P	Y	S	I	K	W	D	N	L	E	R	I	A	M	E	I	K	N	A	L	D	Y	Y	K	N	Q	N	K	E	I	K	L	I	L	V	H	G	G	G	A	F	G	H	P	V	A	K	K	Y	L	K	I	E	D	G	K	K	I	F	I	N	M	E	K
Template Known Secondary structure									T	T	T	S	S		T	T	S	T	T																								T	T																					T	T				S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110			.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.							.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.																												.	.	.	.	.	.
Query SS confidence																																					.	.																												.	.	.	.	.	.
Query Sequence		G	D	H	M	G	M	L	A	T	V	M	N	G	L	A	M	R	D	A	L	H	R	A	Y	V	N	A	R	L	M	S	A	I	P	L	.	.	N	G	V	C	D	S	Y	S	W	A	E	A	I	S	L	L	R	N	N	R	V	V	I	L	S	A	G	.	.	.	.	.	.	T	G	N	P	F	F	T	T	D	S
Query Conservation																																					.	.																												.	.	.	.	.	.
Alig confidence																																					.	.																												.	.	.	.	.	.
Template Conservation
Template Sequence		G	F	W	E	I	Q	R	A	M	R	R	F	N	N	I	I	I	D	T	L	Q	S	Y	D	I	P	A	V	S	I	Q	P	S	S	F	V	V	F	G	D	K	L	I	F	D	T	S	A	I	K	E	M	L	K	R	N	L	V	P	V	I	H	G	D	I	V	I	D	D	K	N	G	Y	R	I	I	S	G	D	D
Template Known Secondary structure																								T	T								G	G	G	T					S	S														T	T													T	T	T
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	C	L	R	G	I	E	I	E	A	D	V	V	L	K	A	T	K	V	D	G	V	F	T	A	D	P	A	K	D	P	T	A	T	M	Y	E	Q	L	T	Y	S	E	V	L	E	K	E	L	K	V	M	D	L	A	A	F	T	L	A	R	D	H	K	L	P	I	R	V	F	N	M	N	K	P	G	A	L	R
Query Conservation
Alig confidence																														.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.
Template Sequence		I	V	P	Y	L	A	N	E	L	K	A	D	L	I	L	Y	A	T	D	V	D	G	V	L	I	D	N	K	.	.	.	.	.	.	.	P	I	K	R	I	D	K	N	N	I	Y	K	I	L	N	Y	L	G	M	K	Y	K	I	E	M	I	R	K	N	K	C	R	G	F	V	F	N	G	N	K	A	N	N	I	Y
Template Known Secondary structure											T		S							S	S	S	S	S			T	T		.	.	.	.	.	.	.			S				S	S	T	T																T	T	T	T	T								S	S	S	T	T
Template Predicted Secondary structure																														.	.	.	.	.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.								190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		228	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	V	M	G	E	K	E	G	T	L	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	A	L	L	G	E	V	E	G	T	E	I
Template Known Secondary structure					T	T				S
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions