Job Description P0A7E9 Confidence 100.00% Date Thu Jan 5 11:05:32 GMT 2012 Rank 21 Aligned Residues 224 % Identity 15% Template c2rd5A_ PDB info PDB header:protein binding Chain: A: PDB Molecule:acetylglutamate kinase-like protein; PDBTitle: structural basis for the regulation of n-acetylglutamate kinase by pii2 in arabidopsis thaliana Resolution 2.51 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.											.	.	.	.	.	.	.
Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	R	I	L	L	K	L	S	G	E	A	L	Q	G	T	E	G	F	G	I	D	A	S	I	L	D	R	M	A	Q	E	I	K	E	L	V	E	L	G	I	Q	V	G	V	V	I	G	G	G	N	L	F	R	G	A	G	L	A	K	A	G	M	N	.	.	.	.	.	.	.	.	.	.	R	V	V	G	D	H	M
Query Conservation																																																																	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.
Template Sequence		K	T	I	V	V	K	Y	G	G	A	A	M	T	.	.	.	.	.	.	.	S	P	E	L	K	S	S	V	V	S	D	L	V	L	L	A	C	V	G	L	R	P	I	L	V	H	G	G	G	P	D	I	N	R	Y	L	K	Q	L	N	I	P	A	E	F	R	D	G	L	R	V	T	D	A	T	T	M	E	I	V
Template Known Secondary structure										T					.	.	.	.	.	.	.																		T	T																				T	T							T	T				B
Template Predicted Secondary structure															.	.	.	.	.	.	.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.								.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.																	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.						.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.
Query Sequence		G	M	L	A	T	V	M	N	G	L	A	M	R	D	A	L	H	R	A	Y	V	N	A	R	L	M	S	A	I	P	L	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	V	C	D	S	Y	S	W	A	E	A	I	S	L	L	R	N	N	R	V	V	I	L	S	A	G	.	.	.	.	.	T
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.
Template Conservation
Template Sequence		S	M	V	L	V	G	K	V	N	K	N	L	V	S	L	I	N	A	A	G	A	T	A	V	G	L	S	G	H	D	G	R	L	L	T	A	R	P	V	P	N	S	A	Q	L	G	F	V	G	E	V	A	R	V	D	P	S	V	L	R	P	L	V	D	Y	G	Y	I	P	V	I	A	S	V	A	A	D	D	S	G
Template Known Secondary structure								T												T	T	S							T	T	G	G	G								T	T					B	S									G	G	G							T	T							S					T	T	S
Template Predicted Secondary structure
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.					.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure																																																											.	.	.	.
Query SS confidence																																																											.	.	.	.
Query Sequence		G	N	P	F	F	T	T	D	S	A	A	C	L	R	G	I	E	I	E	A	D	V	V	L	K	A	T	K	V	D	G	V	F	T	A	D	P	A	K	D	P	T	A	T	M	Y	E	Q	L	T	Y	S	E	V	L	E	K	.	.	.	.	E	L	K	V	M	D	L	A	A	F	T	L	A	R	D	H	K	L	P
Query Conservation																																																											.	.	.	.
Alig confidence																																																											.	.	.	.
Template Conservation
Template Sequence		Q	A	Y	N	I	N	A	D	T	V	A	G	E	L	A	A	A	L	G	A	E	K	L	I	L	L	T	D	V	A	G	I	L	E	N	K	E	D	P	S	S	L	I	K	E	I	D	I	K	G	V	K	K	M	I	E	D	G	K	V	A	G	G	M	I	P	K	V	K	C	C	I	R	S	L	A	Q	G	V	K
Template Known Secondary structure																				T		S							S	S	S	S			S	S	S	S		T	T	S																T	T	S	S		T	T														T	T		S
Template Predicted Secondary structure
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
			215	.	.	.	.	220	.	.	.	.	.	.	.	.		.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure		.															.
Query SS confidence		.															.
Query Sequence		.	I	R	V	F	N	M	N	K	P	G	A	L	R	R	.	V	V	M	G	E	K	E	G	T	L	I	T
Query Conservation		.															.
Alig confidence		.															.
Template Conservation
Template Sequence		T	A	S	I	I	D	G	R	R	Q	H	S	L	L	H	E	I	M	S	D	E	G	A	G	T	M	I	T
Template Known Secondary structure								T	T	S	T	T								S	S	S		S
Template Predicted Secondary structure
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions