Return to main results Retrieve Phyre Job Id

Job DescriptionC1P611
Confidence16.32%DateWed Jan 25 15:20:06 GMT 2012
Rank8Aligned Residues16
% Identity56%Templatec3c9jB_
PDB info PDB header:membrane proteinChain: B: PDB Molecule:proton channel protein m2, transmembrane segment; PDBTitle: the crystal structure of transmembrane domain of m2 protein and2 amantadine complex
Resolution3.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20......
Predicted Secondary structure 
Query SS confidence 















Query Sequence  VIKIIIAVLQLILLFL
Query Conservation 















Alig confidence 















Template Conservation 

 


 








Template Sequence  VAASIIAILHLILWIL
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 















   7..10.........20..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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