Job Description P77156 Confidence 100.00% Date Thu Jan 5 12:25:43 GMT 2012 Rank 1 Aligned Residues 279 % Identity 19% Template c3fh6F_ PDB info PDB header:transport protein Chain: F: PDB Molecule:maltose transport system permease protein malf; PDBTitle: crystal structure of the resting state maltose transporter from e.2 coli Resolution 4.50 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.							.	.	.	70	.	.	.	.	.	.	.	.	.		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.														.
Query SS confidence																																													.	.	.	.	.	.														.
Query Sequence		N	P	G	L	G	L	F	L	L	L	L	G	P	L	M	W	F	G	I	V	Y	F	G	S	L	L	T	L	L	W	Q	G	F	Y	T	F	D	D	F	T	M	S	V	.	.	.	.	.	.	T	P	E	L	T	L	A	N	I	R	A	L	F	.	N	P	A	N	Y	D	I	I	L	R	T	L	T	M	A	V	A
Query Conservation																																													.	.	.	.	.	.														.
Alig confidence																																													.	.	.	.	.	.														.
Template Conservation
Template Sequence		L	S	S	A	G	L	Y	I	Y	V	Y	P	G	M	A	G	M	G	L	F	V	L	F	P	L	V	C	T	I	A	I	A	F	T	N	Y	S	S	T	N	Q	L	T	F	E	R	A	Q	E	V	L	L	D	R	S	K	N	F	T	R	V	F	T	D	E	G	I	Q	K	P	F	L	A	I	F	V	W	T	V	V
Template Known Secondary structure																						T									T	T	S	S	S	S		S	S	S		S	S											T				T	T					S		S	S	S		S
Template Predicted Secondary structure
Template SS confidence
		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.				.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150		.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure																				.	.	.																																					.
Query SS confidence																				.	.	.																																					.
Query Sequence		V	T	I	A	S	A	I	L	A	F	P	M	A	W	Y	M	A	R	.	.	.	Y	T	S	G	K	M	K	A	F	F	Y	I	A	V	M	L	P	M	W	A	S	Y	I	V	K	A	Y	A	W	T	L	L	L	A	K	D	.	G	V	A	Q	W	F	L	Q	H	L	G	L	E	P	L	L	T	A	F	L	T	L
Query Conservation																				.	.	.																																					.
Alig confidence																				.	.	.																																					.											.	.	.	.	.	.	.	.	.
Template Conservation																																																																						.	.	.	.	.	.	.	.	.
Template Sequence		F	S	L	I	T	V	F	L	T	V	A	V	G	M	V	L	A	C	L	V	Q	W	E	A	L	R	G	K	A	V	Y	R	V	L	L	I	L	P	Y	A	V	P	S	F	I	S	I	L	I	F	K	G	L	F	N	Q	S	F	G	E	I	N	M	M	L	S	A	L	.	.	.	.	.	.	.	.	.	F	G	V
Template Known Secondary structure																						T		S	S	S	S															S		S											S		S	S	S	S										.	.	.	.	.	.	.	.	.	S	S
Template Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.	.
Template SS confidence
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.										.	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	V	G	G	N	T	L	S	T	S	G	L	G	R	F	L	V	F	L	Y	I	W	L	P	F	M	I	L	P	V	Q	A	A	L	E	R	L	P	P	S	L	L	Q	A	S	A	D	L	G	A	R	P	R	Q	T	F	R	Y	V	V	L	P	L	A	I	P	G	I	A	A	G	S	I	F	T	F	S	L	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	P	A	W	F	S	D	P	T	T	A	R	T	M	L	I	I	V	N	T	W	L	G	Y	P	Y	M	M	I	L	C	M	G	L	L	K	A	I	P	D	D	L	Y	E	A	S	A	M	D	G	A	G	P	F	Q	N	F	F	K	I	T	L	P	L	L	I	K	P	L	T	P	L	M	I	A	S	F	A	F	N
Template Known Secondary structure					S	S	S	S																															S															S							T	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.
		253	.	.	.	.	.	.	260	.	.	.	.	.														.	.	.	.	270	.	.	.	.	.	.	.	.	.	280				.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Query Sequence		L	G	D	F	I	V	P	Q	L	V	G	P	P	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Y	F	I	G	N	M	V	Y	S	Q	Q	G	A	I	.	.	.	G	N	M	P	M	A	A	A	F	T	L	V	P	I	I	L	I	A	L	Y	L	A	F	V	K	R	L	G	A	F	D
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Template Conservation
Template Sequence		F	N	N	F	V	L	I	Q	L	L	T	N	G	G	P	D	R	L	G	T	T	T	P	A	G	Y	T	D	L	L	V	N	Y	T	Y	R	I	A	F	E	G	G	G	G	Q	D	F	G	L	A	A	A	I	A	T	L	I	F	L	L	V	G	A	L	A	I	V	N	L	K	A	T	R	M	K
Template Known Secondary structure			T										S	S		S			S	S		S	S	S			S	S										T	T		S	S	S	S		S	S																										S	S
Template Predicted Secondary structure
Template SS confidence
		438	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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