Job Description P77156 Confidence 100.00% Date Thu Jan 5 12:25:43 GMT 2012 Rank 2 Aligned Residues 235 % Identity 20% Template c2r6gF_ PDB info PDB header:hydrolase/transport protein Chain: F: PDB Molecule:maltose transport system permease protein malf; PDBTitle: the crystal structure of the e. coli maltose transporter Resolution 2.80 Å

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		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.						.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure																										.	.	.	.	.
Query SS confidence																										.	.	.	.	.
Query Sequence		F	D	D	F	T	M	S	V	T	P	E	L	T	L	A	N	I	R	A	L	F	N	P	A	.	.	.	.	.	N	Y	D	I	I	L	R	T	L	T	M	A	V	A	V	T	I	A	S	A	I	L	A	F	P	M	A	W	Y	M	A	R	Y	T	S	G	K	M	K	A	F	F	Y	I	A	V	M	L	P	M	W
Query Conservation																										.	.	.	.	.
Alig confidence																										.	.	.	.	.																																		.
Template Conservation																																																																.
Template Sequence		D	E	K	L	S	P	G	Y	T	V	T	T	G	W	K	N	F	T	R	V	F	T	D	E	G	I	Q	K	P	F	L	A	I	F	V	W	T	V	V	F	S	L	I	T	V	F	L	T	V	A	V	G	M	V	L	A	C	L	V	Q	W	E	.	A	L	R	G	K	A	V	Y	R	V	L	L	I	L	P	Y	A
Template Known Secondary structure		S				S	S		B			B		T	T	T	T	T	S	G	G	G	T		T	T	T	S	T	T																															T		S	.	S	S	T	T								T	T
Template Predicted Secondary structure																																																																.
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150		.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		A	S	Y	I	V	K	A	Y	A	W	T	L	L	L	A	K	D	.	G	V	A	Q	W	F	L	Q	H	L	G	L	E	P	L	L	T	A	F	L	T	L	P	A	V	G	G	N	T	L	S	T	S	G	L	G	R	F	L	V	F	L	Y	I	W	L	P	F	M	I	L	P	V	Q	A	A	L	E	R	L	P	P
Query Conservation																			.
Alig confidence																			.																		.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.
Template Sequence		V	P	S	F	I	S	I	L	I	F	K	G	L	F	N	Q	S	F	G	E	I	N	M	M	L	S	A	L	F	G	V	K	P	A	W	.	.	.	.	.	.	.	.	.	F	S	D	P	T	T	A	R	T	M	L	I	I	V	N	T	W	L	G	Y	P	Y	M	M	I	L	C	M	G	L	L	K	A	I	P	D
Template Known Secondary structure		S													T		S	S	S	S									T	S	S					T	.	.	.	.	.	.	.	.	.	T	T	S																												G	G	G	S		T
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.
Template SS confidence
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.										.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.														.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	L	L	Q	A	S	A	D	L	G	A	R	P	R	Q	T	F	R	Y	V	V	L	P	L	A	I	P	G	I	A	A	G	S	I	F	T	F	S	L	T	L	G	D	F	I	V	P	Q	L	V	.	.	.	.	.	.	.	.	.	.	.	.	.	G	P	P	G	Y	F	I	G	N	M	V	Y	S	Q	Q	G	A
Query Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	L	Y	E	A	S	A	M	D	G	A	G	P	F	Q	N	F	F	K	I	T	L	P	L	L	I	K	P	L	T	P	L	M	I	A	S	F	A	F	N	F	N	N	F	V	L	I	Q	L	L	T	N	G	G	P	D	R	L	G	T	T	T	P	A	G	Y	T	D	L	L	V	N	Y	T	Y	R	I	A	F	E
Template Known Secondary structure										T				S							T	T	G	G	G	T																	T										S	S		S	B		S	S		S	S			B	S	S												T	S
Template Predicted Secondary structure
Template SS confidence
		398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.
		280	.				.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure				.	.	.
Query SS confidence				.	.	.
Query Sequence		I	G	.	.	.	N	M	P	M	A	A	A	F	T	L	V	P	I	I	L	I	A	L	Y	L	A	F
Query Conservation				.	.	.
Alig confidence				.	.	.
Template Conservation
Template Sequence		G	G	G	G	Q	D	F	G	L	A	A	A	I	A	T	L	I	F	L	L	V	G	A	L	A	I	V
Template Known Secondary structure		S	S	S
Template Predicted Secondary structure
Template SS confidence
		478	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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