Job Description P77156 Confidence 100.00% Date Thu Jan 5 12:25:43 GMT 2012 Rank 3 Aligned Residues 248 % Identity 18% Template c2onkC_ PDB info PDB header:membrane protein Chain: C: PDB Molecule:molybdate/tungstate abc transporter, permease PDBTitle: abc transporter modbc in complex with its binding protein2 moda Resolution 3.10 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure																																																								.
Query SS confidence																																																								.
Query Sequence		G	L	G	L	F	L	L	L	L	G	P	L	M	W	F	G	I	V	Y	F	G	S	L	L	T	L	L	W	Q	G	F	Y	T	F	D	D	F	T	M	S	V	T	P	E	L	T	L	A	N	I	R	A	L	F	.	N	P	A	N	Y	D	I	I	L	R	T	L	T	M	A	V	A	V	T	I	A	S	A	I	L
Query Conservation																																																								.
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	L	L	F	S	A	L	L	A	L	L	S	S	I	I	L	L	F	V	L	L	P	V	A	A	T	V	T	L	Q	L	.	.	.	.	.	.	.	.	.	.	.	.	.	F	N	F	D	E	F	L	K	A	A	S	D	P	A	V	W	K	V	V	L	T	T	Y	Y	A	A	L	I	S	T	L	I	A	V	I	F
Template Known Secondary structure																														T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.														.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	F	P	M	A	W	Y	M	A	R	Y	T	S	G	K	M	K	A	F	F	Y	I	A	V	M	L	P	M	W	A	S	Y	I	V	K	A	Y	A	W	T	L	L	L	A	K	D	G	V	A	Q	W	F	L	Q	H	L	G	L	E	P	L	L	T	A	F	L	T	L	P	A	V	G	G	N	T	L	S	T	S	G
Query Conservation
Alig confidence																	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	T	P	L	A	Y	I	L	A	R	K	S	F	P	G	.	K	S	V	V	E	G	I	V	D	L	P	V	V	I	P	H	T	V	A	G	I	A	L	L	V	V	F	G	S	S	G	L	I	G	S	F	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	L	K	F	V	D	A	L
Template Known Secondary structure											S				S	S	.														S														S	T	T	S	T	T	T	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S			T	T	S
Template Predicted Secondary structure																	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.		.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120																				.	.	.	.	.	.	.	.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	R	F	L	V	F	L	Y	I	W	L	P	F	M	I	L	P	V	Q	A	A	L	E	R	L	P	P	S	L	L	Q	A	S	A	D	L	G	A	R	P	R	Q	T	F	R	Y	V	V	L	P	L	A	I	P	G	I	A	A	G	S	I	F	T	F	S	L	T	L	G	D	F	I	V	P	Q	L	V	G	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	G	I	V	V	A	M	L	F	V	S	V	P	I	Y	I	N	Q	A	K	E	G	F	A	S	V	D	V	R	L	E	H	V	A	R	T	L	G	S	S	P	L	R	V	F	F	T	V	S	L	P	L	S	V	R	H	I	V	A	G	A	I	M	S	W	A	R	G	I	S	E	F	G	A	V	V	V	I	A	Y
Template Known Secondary structure																											S											T	T										T																													T	T
Template Predicted Secondary structure
Template SS confidence
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	Y	F	I	G	N	M	V	Y	S	Q	Q	G	A	I	G	N	M	P	M	A	A	A	F	T	L	V	P	I	I	L	I	A	L	Y	L	A	F	V	K	R	L
Query Conservation
Alig confidence																		.
Template Conservation																		.
Template Sequence		Y	P	M	I	A	P	T	L	I	Y	E	R	Y	L	S	E	.	G	L	S	A	A	M	P	V	A	A	I	L	I	L	L	S	L	A	V	F	V	A	L	R	I	I
Template Known Secondary structure		S	S															.		G	G	G	T																					T
Template Predicted Secondary structure																		.
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.		.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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