Job Description P77156 Confidence 1.19% Date Thu Jan 5 12:25:43 GMT 2012 Rank 85 Aligned Residues 160 % Identity 13% Template c1oy8A_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:acriflavine resistance protein b; PDBTitle: structural basis of multiple drug binding capacity of the acrb2 multidrug efflux pump Resolution 3.63 Å

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		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	I	L	A	F	P	M	A	W	Y	M	A	R	Y	T	S	G	K	M	K	A	F	F	Y	I	A	V	M	L	P	M	W	A	S	Y	I	V	K	A	Y	A	W	T	L	L	L	A	K	D	G	V	A	Q	W	F	L	Q	H	L	G	L	E	P	L	L	T	A	F	L	T	L	P	A	V	G	G	N	T	L
Query Conservation
Alig confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	Y	A	I	S	L	I	V	V	F	L	C	L	A	A	L	Y	E	S	W	S	I	P	F	S	V	M	L	V	V	P	L	G	V	I	G	A	L	L	A	A	T	F	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	T	N
Template Known Secondary structure														T	T	S	S			S	S	S	G	G	G	T	G	G	G																S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S			B
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		876	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.																																	920	.	.	.
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure
Query SS confidence
Query Sequence		S	T	S	G	L	G	R	F	L	V	F	L	Y	I	W	L	P	F	M	I	L	P	V	Q	A	A	L	E	R	L	P	P	S	L	L	Q	A	S	A	D	L	G	A	R	P	R	Q	T	F	R	Y	V	V	L	P	L	A	I	P	G	I	A	A	G	S	I	F	T	F	S	L	T	L	G	D	F	I	V	P	Q
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.																																								.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.																																								.	.	.	.	.	.
Template Sequence		D	V	Y	F	Q	V	G	L	L	T	T	I	G	L	S	A	K	N	A	I	L	I	V	.	.	.	.	.	.	.	.	E	F	A	K	D	L	M	D	K	E	G	K	G	L	I	E	A	T	L	D	A	V	R	M	R	L	R	P	I	L	M	T	S	L	A	F	I	L	G	.	.	.	.	.	.	V	M	P	L
Template Known Secondary structure																									.	.	.	.	.	.	.	.								S	S	S				T	T	T							T	T	T															.	.	.	.	.	.	S
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.																																								.	.	.	.	.	.
Template SS confidence
		924	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.									.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.							.	.	.	.
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	G	P	P	G	Y	F	I	G	N	M	V	Y	S	Q	Q	G	A	I	G	N	M	P	M	A	A	A	F	T	L	V	P	I	I	L	I	A	L	Y	L	A	F	V	K	R	L	G	A
Query Conservation
Alig confidence											.	.	.
Template Conservation											.	.	.
Template Sequence		V	I	S	T	G	A	G	S	G	.	.	.	A	Q	N	A	V	G	T	G	V	M	G	G	M	V	T	A	T	V	L	A	I	F	F	V	P	V	F	F	V	V	V	R	R	R	F	S	R
Template Known Secondary structure			T	T			S	S		S	.	.	.																					T	S	S	S	S	S	S								T	T	T
Template Predicted Secondary structure											.	.	.
Template SS confidence
		990	.	.	.	.	.	.	.	.				.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions