Return to main results Retrieve Phyre Job Id

Job DescriptionP52643
Confidence96.94%DateThu Jan 5 12:05:56 GMT 2012
Rank292Aligned Residues69
% Identity16%Templated1p3da1
SCOP infoMurCD N-terminal domain MurCD N-terminal domain MurCD N-terminal domain
Resolution1.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   143......150....... ..160.........170.........180 ......... 190.........200.........210.
Predicted Secondary structure 






.







...



..







Query SS confidence 














.






















. . .








. .





















Query Sequence  YGKTAGVIGTGKIGV. AMLRILKGFGMRLLAFDPYPSAA. . . ALELGVEYV. . DLPTLFSESDVISLHCPLTPEN
Query Conservation   
  




 
 

 . 

  
  

  
          ...         .. 
 


  



 
  


  
Alig confidence 














.






















...








..





















Template Conservation    
 
 




 

 



  
   
  
   
         
               
   
 

 



    
Template Sequence  RVQQIHFIGIGGAGXSGIAEILLNEGYQISGSDIADGVVTQRLAQAGAKIYIGHAEEHIEGASVVVVSSAIKDDN
Template Known Secondary structure  T

TTTSTTT
S

STT
S

GGGGTT
S
TTS
TT
Template Predicted Secondary structure 






























Template SS confidence 










































































   17..20.........30.........40.........50.........60.........70.........80.........90.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions