 |
Job Description | P52643 | Confidence | 97.52% | Date | Thu Jan 5 12:05:56 GMT 2012 |
Rank | 198 | Aligned Residues | 89 |
% Identity | 21% | Template | d1ml4a2 |
SCOP info | ATC-like
| Aspartate/ornithine carbamoyltransferase
| Aspartate/ornithine carbamoyltransferase
|
Resolution | 1.80 |
|
 |
  |   |
141 | . | . | . | . | . | . | . | . | 150 | . | |
|
|
. | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | |
|
|
. | . | . | . | 180 | . | . | . | |
|
|
|
|
|
|
. | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |
| . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
| . | . | . |
|
|
|  |  |  |  |  | . | . | . | . | . | . | . |
|
|
|  |  |
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | M | Y | G | K | T | A | G | V | I | G | . |
. |
. |
T | G | K | I | G | V | A | M | L | R | I | L | K | G | F | G | M | R | L | L | A | F | D | P | . |
. |
. |
Y | P | S | A | A | A | L | E | . |
. |
. |
. |
. |
. |
. |
L | G | V | E | Y | V | D | L | P | T | L | F | S | E | S | D | V | I | S | L | H | C | P | L |
Query Conservation |   |
  |
|   |
|   |   |
|
|
|
|
| . | . | . |   |
|   |
|
|   |   |
|
|   |   |
|   |   |
|
|   |   |
|   |   |   |   |   | . | . | . |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . |   |   |   |   |   |   |   |
|   |
|
|
|   |   |
|
|
|
|   |
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |   |
|
|   |
|
|
|   |   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |
|   |   |
|
|   |   |   |
|
|
|
|
|
|   |   |   |   |
Template Sequence |   |
R | I | D | G | L | K | I | G | L | L | G | D | L | K | Y | G | R | T | V | H | S | L | A | E | A | L | T | F | Y | D | V | E | L | Y | L | I | S | P | E | L | L | R | M | P | R | H | I | V | E | E | L | R | E | K | G | M | K | V | V | E | T | T | T | L | E | D | V | I | G | K | L | D | V | L | Y | V | T | R | I | Q |
Template Known Secondary structure |   |
|
| S | S |  |  |  |  |  |  | S |
| T | T | T |
|  |  |  |  |  |  |  |  |  | G | G | G | S |
|  |  |  |  |  |  |
|
| G | G | G |
|
|
|  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  | S |
| T |  |  |  |  | T | T |
| S |  |  |  |  |
|
|
|
|
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
152 | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . |
  |
  |   |
208 | . | 210 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | P | E | N | Y | H | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | L | N | E | A | A | F | E | Q | M | K | N | G | V | M | I |
Query Conservation |   |
|   |   |
|   |   | . | . | . | . | . | . | . | . | . | . | . |
|
|   |   |   |   |
|   |   |
|
|   |
|
|   |
|
Alig confidence |   |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |
|   |   |
|   |   |   |
|   |
|
Template Sequence |   |
K | E | R | F | P | D | E | Q | E | Y | L | K | V | K | G | S | Y | Q | V | N | L | K | V | L | E | K | A | K | D | E | L | R | I |
Template Known Secondary structure |   |
G | G | G | S | S | S |  |  |  |  |  | T | T | T | T |
|
|
| B |
| T | T | G | G | G | G | S |
| T | T |
|  |  |
Template Predicted Secondary structure |   |
 |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
232 | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|