Job Description P52643 Confidence 96.67% Date Thu Jan 5 12:05:56 GMT 2012 Rank 328 Aligned Residues 91 % Identity 16% Template c8ldhA_ PDB info PDB header:oxidoreductase(choh(d)-nad(a)) Chain: A: PDB Molecule:m4 apo-lactate dehydrogenase; PDBTitle: refined crystal structure of dogfish m4 apo-lactate2 dehydrogenase Resolution 2.80 Å

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		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.			.	170	.	.	.	.	.	.	.	.	.	180	.	.														.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure																												.	.															.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Query SS confidence																												.	.															.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Query Sequence		Y	G	K	T	A	G	V	I	G	T	G	K	I	G	V	A	M	L	R	I	L	K	G	F	G	M	.	.	R	L	L	A	F	D	P	Y	P	S	A	A	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	E	L	G	V	E	Y	V	D	L	P	T	L	F	S	E	S	D	V	I	S	L	H	C	.	.
Query Conservation																												.	.															.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Alig confidence																												.	.															.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Template Conservation
Template Sequence		S	Y	N	K	I	T	V	V	G	V	G	A	V	G	M	A	C	A	I	S	I	L	M	K	D	L	A	D	E	V	A	L	V	D	V	M	E	D	K	L	K	G	E	M	M	D	L	Q	H	G	S	L	F	L	H	T	A	K	I	V	S	G	K	D	Y	S	V	S	A	G	S	K	L	V	V	I	T	A	G	A
Template Known Secondary structure			S	S								S												T	T	T			S							S															T	G	G	G										S	S	G	G	G	G	T	T		S
Template Predicted Secondary structure
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
						206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.								.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure		.	.	.	.																			.	.	.	.	.	.	.
Query SS confidence		.	.	.	.																			.	.	.	.	.	.	.
Query Sequence		.	.	.	.	P	L	T	P	E	N	Y	H	L	L	N	E	A	A	F	E	Q	M	.	.	.	.	.	.	.	K	N	G	V	M	I	V	N	T	S
Query Conservation		.	.	.	.																			.	.	.	.	.	.	.
Alig confidence		.	.	.	.																			.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	Q	Q	E	G	E	S	R	L	N	L	V	Q	R	N	V	N	I	F	K	F	I	I	P	N	I	V	K	H	S	P	D	C	I	I	L	V	V	S
Template Known Secondary structure					T	T																										T	T							S
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions