Job Description P52643 Confidence 97.52% Date Thu Jan 5 12:05:56 GMT 2012 Rank 199 Aligned Residues 117 % Identity 20% Template c3vh3A_ PDB info PDB header:metal binding protein/protein transport Chain: A: PDB Molecule:ubiquitin-like modifier-activating enzyme atg7; PDBTitle: crystal structure of atg7ctd-atg8 complex Resolution 2.00 Å

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		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.		.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.		.	170	.	.	.	.
Predicted Secondary structure																															.																												.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.																												.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	M	T	L	N	R	R	I	H	R	A	Y	Q	R	T	R	D	A	N	F	S	L	E	G	L	T	G	F	T	.	M	Y	G	K	T	A	G	V	I	G	T	G	K	I	G	V	A	M	L	R	I	L	K	G	F	G	M	.	R	L	L	A	F	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																															.																												.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.											.																												.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.
Template Sequence		M	L	K	I	A	D	Q	S	V	D	L	N	L	K	L	M	K	.	.	W	R	I	L	P	D	L	N	L	D	I	I	K	N	T	K	V	L	L	L	G	A	G	T	L	G	C	Y	V	S	R	A	L	I	A	W	G	V	R	K	I	T	F	V	D	N	G	T	V	S	Y	S	N	P	V	R	Q	A	L	Y	N
Template Known Secondary structure																			.	.			T		T	T								T									S													T	T											B			T	T	S	T	T	T	S	T	T
Template Predicted Secondary structure																			.	.
Template SS confidence
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310			.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
																						175	.	.	.	.	180	.	.	.	.	.	.																.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	Y	P	S	A	A	A	L	E	L	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	Y	V	D	L	P	T	L	F	S	E	S	D	V	I	S	L	H	C	P	L	T	P	E	N	Y	H	L	L	N	E	A	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template Conservation																																																																				.
Template Sequence		F	E	D	C	G	K	P	K	A	E	L	A	A	A	S	L	K	R	I	F	P	L	M	D	A	T	G	V	K	L	S	I	P	M	I	G	H	K	L	V	N	E	E	A	Q	H	K	D	F	D	R	L	R	A	L	I	K	E	H	D	I	I	F	L	L	V	.	D	S	R	E	S	R	W	L	P	S	L	L	S
Template Known Secondary structure		G	G	G	T	T	S	B														T	T													T	T	S			S																				S							.	S	S	T	G	G	G
Template Predicted Secondary structure																																																																				.
Template SS confidence
		372	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.		.	.	440	.	.	.	.	.	.	.	.	.	450
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	E	Q	M	K	N	G	V	M	I	V	N	T	S	R	G
Query Conservation
Alig confidence					.	.	.
Template Conservation					.	.	.
Template Sequence		N	I	E	.	.	.	N	K	T	V	I	N	A	A	L	G
Template Known Secondary structure				T	.	.	.	T
Template Predicted Secondary structure					.	.	.
Template SS confidence
		451	.	.				.	.	.	.	.	.	460	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions