Job Description P52643 Confidence 96.16% Date Thu Jan 5 12:05:56 GMT 2012 Rank 386 Aligned Residues 168 % Identity 14% Template c3pdiB_ PDB info PDB header:protein binding Chain: B: PDB Molecule:nitrogenase mofe cofactor biosynthesis protein nifn; PDBTitle: precursor bound nifen Resolution 2.40 Å

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		2	.	.	.	.	.	.	.	10	.	.	.				.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.
Query SS confidence														.	.	.
Query Sequence		K	L	A	V	Y	S	T	K	Q	Y	D	K	.	.	.	K	Y	L	Q	Q	V	N	E	S	F	G	F	E	L	E	F	F	D	F	L	L	T	E	K	T	A	K	T	A	N	G	C	E	A	V	C	I	F	V	N	D	D	G	S	R	P	V	L	E	E	L	K	K	H	G	V	K	Y	I	A	L	R	C	A	G
Query Conservation														.	.	.
Alig confidence														.	.	.																								.	.
Template Conservation																																								.	.
Template Sequence		Q	V	N	V	L	C	S	A	N	L	T	P	G	D	L	E	Y	I	A	E	S	I	E	S	F	G	L	R	P	L	L	I	P	D	L	S	G	S	.	.	L	D	G	H	L	D	E	N	R	F	N	A	L	T	T	G	G	L	S	V	A	E	L	A	T	A	G	Q	S	V	A	T	L	V	V	G	Q	S	L	A
Template Known Secondary structure									T	T															T	T	T							S						.	.	S	S	S				S	S			T	T			S		S	B						G	G	G	S	S		S						S	G	G	G
Template Predicted Secondary structure																																								.	.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.			.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		F	N	N	V	D	L	D	A	A	K	E	L	G	L	K	V	V	R	V	P	A	.	Y	D	P	E	A	V	A	E	H	A	I	G	M	M	M	T	L	N	R	R	I	H	R	A	Y	Q	R	T	R	D	A	N	F	S	L	E	G	L	T	G	F	T	M	Y	G	K	T	A	G	V	I	G	T	G	K	I	G	V
Query Conservation																							.
Alig confidence		.	.																				.
Template Conservation		.	.
Template Sequence		.	.	G	A	A	D	A	L	A	E	R	T	G	V	P	D	R	R	F	G	M	L	Y	G	L	D	A	V	D	A	W	L	M	A	L	A	E	I	S	G	N	P	V	P	D	R	Y	K	R	Q	R	A	Q	L	Q	D	A	M	L	D	T	H	F	M	L	S	S	A	R	T	A	I	A	A	D	P	D	L	L	L
Template Known Secondary structure		.	.										S										S																		S	S																									T	T
Template Predicted Secondary structure		.	.
Template SS confidence
				249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	L	R	I	L	K	G	F	G	M	R	L	L	A	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	F	D	A	L	L	R	S	M	G	A	H	T	V	A	A
Template Known Secondary structure									T	T	T
Template Predicted Secondary structure
Template SS confidence
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions